RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 C9IYK1 514 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 GAS2O43903 313 aaKnown RBP14.22□□□□□ -0.13
CCDC57-211ENST00000578187 MGEA5O60502 916 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 GPR37L1O60883 481 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 BMP15O95972 392 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 XRCC6P12956 609 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCDC57-211ENST00000578187 LAG3P18627 525 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 RARRES1P49788 294 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 POLGP54098 1239 aaPredicted RBP14.22□□□□□ -0.13
CCDC57-211ENST00000578187 XKR9Q5GH70 373 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 PDE12Q6L8Q7 609 aaKnown RBP14.22□□□□□ -0.13
CCDC57-211ENST00000578187 POTEGQ6S5H5 508 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 ADHFE1Q8IWW8 467 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 EXOC8Q8IYI6 725 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 SPPL3Q8TCT6 385 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 SLC7A3Q8WY07 619 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 ADAMTS10Q9H324 1103 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 ZSCAN16Q9H4T2 348 aaPredicted RBP14.22□□□□□ -0.13
CCDC57-211ENST00000578187 DACT1Q9NYF0 836 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 PUF60Q9UHX1 559 aaKnown RBP14.22□□□□□ -0.13
CCDC57-211ENST00000578187 CD207Q9UJ71 328 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 STK24Q9Y6E0 443 aa14.22□□□□□ -0.13
CCDC57-211ENST00000578187 PDIA4P13667 645 aaKnown RBP14.21□□□□□ -0.13
CCDC57-211ENST00000578187 GATMP50440 423 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 GPC3P51654 580 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 SMAD4Q13485 552 aaKnown RBP14.21□□□□□ -0.13
CCDC57-211ENST00000578187 EMC2Q15006 297 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
CCDC57-211ENST00000578187 CLUL1Q15846 466 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 FAM102BQ5T8I3 360 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 LRRC43Q8N309 656 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 EFHBQ8N7U6 833 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 SNX29Q8TEQ0 813 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 PIGOQ8TEQ8 1089 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 FAM122AQ96E09 287 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 LRFN3Q9BTN0 628 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 GCOM2Q9BZD3 368 aaPredicted RBP14.21□□□□□ -0.13
CCDC57-211ENST00000578187 INO80BQ9C086 356 aaPredicted RBP14.21□□□□□ -0.13
CCDC57-211ENST00000578187 TMEM117Q9H0C3 514 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 XPNPEP1Q9NQW7 623 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 TLR9Q9NR96 1032 aa14.21□□□□□ -0.13
CCDC57-211ENST00000578187 DBR1Q9UK59 544 aaKnown RBP14.21□□□□□ -0.13
CCDC57-211ENST00000578187 ATG2AQ2TAZ0 1938 aa14.21□□□□□ -0.14
CCDC57-211ENST00000578187 VWA3AA6NCI4 1184 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 PP2D1A8MPX8 630 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 DGAT1O75907 488 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 FGF18O76093 207 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 FGFR1P11362 822 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 DARSP14868 501 aaKnown RBP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 SFPQP23246 707 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 PPM1AP35813 382 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 LTBRP36941 435 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 CCT6AP40227 531 aaKnown RBP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 NRIP1P48552 1158 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 FAM189BP81408 668 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 KRT17Q04695 432 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 ADAM15Q13444 863 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 PTPAQ15257 358 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 SMAD2Q15796 467 aaKnown RBP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 ECM1Q16610 540 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 FAM173BQ6P4H8 233 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 ZNF410Q86VK4 478 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 COLGALT1Q8NBJ5 622 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 RNF169Q8NCN4 708 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 RSPH1Q8WYR4 309 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 CCDC43Q96MW1 224 aaKnown RBP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 NACC1Q96RE7 527 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 CDCA3Q99618 268 aaPredicted RBP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 MTRQ99707 1265 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 MMTAG2Q9BU76 263 aaKnown RBP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 TLE6Q9H808 572 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 CD320Q9NPF0 282 aa14.2□□□□□ -0.14
CCDC57-211ENST00000578187 TYW1Q9NV66 732 aaKnown RBP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 SUCLA2Q9P2R7 463 aaPredicted RBP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 MORC2Q9Y6X9 1032 aaPredicted RBP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 FNDC1Q4ZHG4 1894 aaPredicted RBP14.2□□□□□ -0.14
CCDC57-211ENST00000578187 CARNS1A5YM72 827 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 MBTPS2O43462 519 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 DCXO43602 365 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 TBX10O75333 385 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 EOMESO95936 686 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 SKIP12755 728 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 DNAJB1P25685 340 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 GTF2F1P35269 517 aaKnown RBP eCLIP14.19□□□□□ -0.14
CCDC57-211ENST00000578187 ZP2Q05996 745 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 CAMK1Q14012 370 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 DSC3Q14574 896 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 BMS1Q14692 1282 aaKnown RBP14.19□□□□□ -0.14
CCDC57-211ENST00000578187 HYIQ5T013 277 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 KRT79Q5XKE5 535 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 RBM23Q86U06 439 aaKnown RBP14.19□□□□□ -0.14
CCDC57-211ENST00000578187 TCP11Q8WWU5 503 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 PSPC1Q8WXF1 523 aaKnown RBP14.19□□□□□ -0.14
CCDC57-211ENST00000578187 ZNF558Q96NG5 402 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 MRPL9Q9BYD2 267 aaKnown RBP14.19□□□□□ -0.14
CCDC57-211ENST00000578187 CHST12Q9NRB3 414 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 BMP2KQ9NSY1 1161 aaPredicted RBP14.19□□□□□ -0.14
CCDC57-211ENST00000578187 LZTS1Q9Y250 596 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 ARIH1Q9Y4X5 557 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms