RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 SRGAP2BP0DMP2 458 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 SKIP12755 728 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 YWHABP31946 246 aaKnown RBP18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 RFC5P40937 340 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 RAB27AP51159 221 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 BCAR1P56945 870 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 NCAPH2Q6IBW4 605 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 SLFN12Q8IYM2 578 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 NSUN7Q8NE18 718 aaKnown RBP18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 SUSD6Q92537 303 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 LPPQ93052 612 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 TMEM143Q96AN5 459 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 AGPAT5Q9NUQ2 364 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 RGL1Q9NZL6 768 aa18.61■□□□□ 0.57
CDK5RAP3-206ENST00000578018 ZDBF2Q9HCK1 2354 aa18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 MEIS3P2A8K0S8 358 aa18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 MARCH6O60337 910 aa18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 CYP4A11Q02928 519 aa18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 CBX2Q14781 532 aaPredicted RBP18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 EMC2Q15006 297 aa18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 GLB1LQ6UWU2 654 aa18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 TMC7Q7Z402 723 aa18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 EXOC8Q8IYI6 725 aa18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 PRPF31Q8WWY3 499 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 PSPC1Q8WXF1 523 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 DYDC2Q96IM9 177 aa18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 PHF7Q9BWX1 381 aaPredicted RBP18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 BRMS1Q9HCU9 246 aa18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 BMP2KQ9NSY1 1161 aaPredicted RBP18.6■□□□□ 0.57
CDK5RAP3-206ENST00000578018 NT5C1B-RDH14C9J2C7 533 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 GAS2O43903 313 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 ZNF623O75123 536 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 ZC3H11AO75152 810 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 TECP42680 631 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 ALDH7A1P49419 539 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 LAMTOR4Q0VGL1 99 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 CTTNQ14247 550 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 SMC1AQ14683 1233 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 LONRF3Q496Y0 759 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 ANKRD54Q6NXT1 300 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 LLGL2Q6P1M3 1020 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 SYCE2Q6PIF2 218 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 SRGAP1Q7Z6B7 1085 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 TMEM173Q86WV6 379 aaPredicted RBP18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 S1PR5Q9H228 398 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 ZSWIM4Q9H7M6 989 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 MINDY3Q9H8M7 445 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 TBC1D13Q9NVG8 400 aa18.59■□□□□ 0.57
CDK5RAP3-206ENST00000578018 C2orf71A6NGG8 1288 aa18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 JAK2O60674 1132 aa18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 BAG4O95429 457 aaKnown RBP18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 SRGAP2CP0DJJ0 459 aa18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 XKR9Q5GH70 373 aa18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 NOMO2Q5JPE7 1267 aa18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 OTUD6AQ7L8S5 288 aa18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 MRPL43Q8N983 215 aaKnown RBP18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 TMEM169Q96HH4 297 aa18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 INPP5FQ9Y2H2 1132 aa18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 PCDHB2Q9Y5E7 798 aa18.58■□□□□ 0.56
CDK5RAP3-206ENST00000578018 BTBD18B2RXH4 712 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 WNT7AO00755 349 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 ZBTB39O15060 712 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 OFD1O75665 1012 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 ST3GAL1Q11201 340 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 FERMT3Q86UX7 667 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 DIS3L2Q8IYB7 885 aaKnown RBP18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 BCL7CQ8WUZ0 217 aaPredicted RBP18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 TCP11Q8WWU5 503 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 ZBP1Q9H171 429 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 NRDE2Q9H7Z3 1164 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 XPNPEP1Q9NQW7 623 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 HCFC2Q9Y5Z7 792 aa18.57■□□□□ 0.56
CDK5RAP3-206ENST00000578018 CARNS1A5YM72 827 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 B4GALT3O60512 393 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 NEMFO60524 1076 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 SLITRK3O94933 977 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 LYPLA2O95372 231 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 HOXB8P17481 243 aaPredicted RBP18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 HOXA11P31270 313 aaPredicted RBP18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 NEK4P51957 841 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 FOSBP53539 338 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 CALCRLQ16602 461 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 UBXN11Q5T124 520 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 AGMOQ6ZNB7 445 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 HFE2Q6ZVN8 426 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 MRPL10Q7Z7H8 261 aaKnown RBP18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 TPH2Q8IWU9 490 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 VPS52Q8N1B4 723 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 RNF149Q8NC42 400 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 EDAQ92838 391 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 CASP10Q92851 521 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 PGBD4Q96DM1 585 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 IGSF21Q96ID5 467 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 RPGRIP1Q96KN7 1286 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 MTRQ99707 1265 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 HSD17B14Q9BPX1 270 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 EIF2AK1Q9BQI3 630 aaKnown RBP18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 APOL5Q9BWW9 433 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 DNAJB4Q9UDY4 337 aa18.56■□□□□ 0.56
CDK5RAP3-206ENST00000578018 PCDHA12Q9UN75 941 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms