RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 CITO14578 2027 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 ARHGEF35A5YM69 484 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 H3BQV1 296 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 USO1O60763 962 aaKnown RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 DTNBO60941 627 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 SRGAP2CP0DJJ0 459 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 XRCC6P12956 609 aaKnown RBP eCLIP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 FGFR4P22455 802 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 ALDH7A1P49419 539 aaKnown RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 RARRES1P49788 294 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 RNASELQ05823 741 aaKnown RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 COL19A1Q14993 1142 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 NOTUMQ6P988 496 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 ZBTB8OSQ8IWT0 167 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 HELQQ8TDG4 1101 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 MICAL1Q8TDZ2 1067 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 PRPF31Q8WWY3 499 aaKnown RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 TMEM143Q96AN5 459 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 MTMR9Q96QG7 549 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 NACC1Q96RE7 527 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 KIF2CQ99661 725 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 C2orf40Q9H1Z8 148 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 NGRNQ9NPE2 291 aaKnown RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 UBN1Q9NPG3 1134 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 TYW1Q9NV66 732 aaKnown RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 SPG21Q9NZD8 308 aa11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.31□□□□□ -0.6
SUPT6H-204ENST00000577939 ZMYM2Q9UBW7 1377 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 INO80B-WBP1J3KQ70 363 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 ZC3H11AO75152 810 aaKnown RBP eCLIP11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 SLITRK3O94933 977 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 SSTR3P32745 418 aaPredicted RBP11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 PLCB3Q01970 1234 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 POU5F1BQ06416 359 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 SMAD4Q13485 552 aaKnown RBP11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 PPP2R5AQ15172 486 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 MCTP1Q6DN14 999 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 KCNT2Q6UVM3 1135 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 EFHBQ8N7U6 833 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 TMEM87AQ8NBN3 555 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 SPPL3Q8TCT6 385 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 MRPS27Q92552 414 aaKnown RBP11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 CASD1Q96PB1 797 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 FAM193BQ96PV7 902 aaPredicted RBP11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 HSD17B14Q9BPX1 270 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 NFKBIZQ9BYH8 718 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 TLE6Q9H808 572 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 IFT122Q9HBG6 1241 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 KANSL3Q9P2N6 904 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 PRKAG3Q9UGI9 489 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 DBR1Q9UK59 544 aaKnown RBP11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 MYH15Q9Y2K3 1946 aa11.3□□□□□ -0.6
SUPT6H-204ENST00000577939 LRRIQ4A6NIV6 560 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 H3BQ06 376 aaPredicted RBP11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 ZNF623O75123 536 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 U2AF2P26368 475 aaKnown RBP eCLIP11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 RPA1P27694 616 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 TECP42680 631 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.61e-8■■■■□ 23.7
SUPT6H-204ENST00000577939 PTENP60484 403 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 HYAL1Q12794 435 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 GIT2Q14161 759 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 SMC1AQ14683 1233 aaKnown RBP11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 ZNF174Q15697 407 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 RILPL1Q5EBL4 403 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 NOMO2Q5JPE7 1267 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 CLLU1OSQ5K130 101 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 APBB1IPQ7Z5R6 666 aaPredicted RBP11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 TBC1D32Q96NH3 1257 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 C1QTNF1Q9BXJ1 281 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 TMEM60Q9H2L4 133 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 IGFLR1Q9H665 355 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 CWH43Q9H720 699 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 RSAD1Q9HA92 442 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 LRWD1Q9UFC0 647 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 CD207Q9UJ71 328 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 SMC3Q9UQE7 1217 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 INPP5FQ9Y2H2 1132 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 PCDHB2Q9Y5E7 798 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 PHLPP2Q6ZVD8 1323 aa11.29□□□□□ -0.6
SUPT6H-204ENST00000577939 GRXCR2A6NFK2 248 aa11.28□□□□□ -0.6
SUPT6H-204ENST00000577939 ATF7P17544 494 aaPredicted RBP11.28□□□□□ -0.6
SUPT6H-204ENST00000577939 CA8P35219 290 aa11.28□□□□□ -0.6
SUPT6H-204ENST00000577939 CCT6AP40227 531 aaKnown RBP11.28□□□□□ -0.6
SUPT6H-204ENST00000577939 PRPHP41219 470 aa11.28□□□□□ -0.6
SUPT6H-204ENST00000577939 NRIP1P48552 1158 aa11.28□□□□□ -0.6
SUPT6H-204ENST00000577939 CAPSQ13938 189 aa11.28□□□□□ -0.6
SUPT6H-204ENST00000577939 CTC1Q2NKJ3 1217 aa11.28□□□□□ -0.6
SUPT6H-204ENST00000577939 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms