RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 KLHDC9Q8NEP7 349 aa11.14□□□□□ -0.63
CRLF3-202ENST00000577725 EDAQ92838 391 aa11.14□□□□□ -0.63
CRLF3-202ENST00000577725 ATP6V0A1Q93050 837 aa11.14□□□□□ -0.63
CRLF3-202ENST00000577725 CCDC43Q96MW1 224 aaKnown RBP11.14□□□□□ -0.63
CRLF3-202ENST00000577725 MED15Q96RN5 788 aa11.14□□□□□ -0.63
CRLF3-202ENST00000577725 LRRC27Q9C0I9 530 aa11.14□□□□□ -0.63
CRLF3-202ENST00000577725 SYNRGQ9UMZ2 1314 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 PVALEFA0A1B0GWK0 134 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 PRR23AA6NEV1 266 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 BECN2A8MW95 431 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 NOP56O00567 594 aaKnown RBP11.13□□□□□ -0.63
CRLF3-202ENST00000577725 HIP1RO75146 1068 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 TBCAO75347 108 aaKnown RBP11.13□□□□□ -0.63
CRLF3-202ENST00000577725 ARHGEF15O94989 841 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 CD4P01730 458 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 ZNF865P0CJ78 1059 aaPredicted RBP11.13□□□□□ -0.63
CRLF3-202ENST00000577725 IRS1P35568 1242 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 PRCPP42785 496 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 RARRES1P49788 294 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 CCL23P55773 120 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
CRLF3-202ENST00000577725 NCAPHQ15003 741 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 CCDC144BQ3MJ40 725 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 MTERF2Q49AM1 385 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 OR6J1Q8NGC5 347 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 AFG1LQ8WV93 481 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 NELFBQ8WX92 580 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 SEPT1Q8WYJ6 367 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 VTI1AQ96AJ9 217 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 NAT10Q9H0A0 1025 aaKnown RBP11.13□□□□□ -0.63
CRLF3-202ENST00000577725 ABHD16BQ9H3Z7 469 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 ALG13Q9NP73 1137 aaKnown RBP11.13□□□□□ -0.63
CRLF3-202ENST00000577725 MUTYHQ9UIF7 546 aa11.13□□□□□ -0.63
CRLF3-202ENST00000577725 DBR1Q9UK59 544 aaKnown RBP11.13□□□□□ -0.63
CRLF3-202ENST00000577725 UMODL1Q5DID0 1318 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 IGKV6D-21A0A0A0MT36 114 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 TRIM49BA6NDI0 452 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 TMEM221A6NGB7 291 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 GOLGA6L19H0YKK7 550 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 M0R296 226 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 LGR5O75473 907 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 FAM13AO94988 1023 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 OATP04181 439 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 ZNF286BP0CG31 522 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 STAT5BP51692 787 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 EHHADHQ08426 723 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 MAPK7Q13164 816 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 HSP90AA4PQ58FG1 418 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 FAM26FQ5R3K3 315 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 FAM160B1Q5W0V3 765 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 DAW1Q8N136 415 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 ADSSL1Q8N142 457 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 MSL3Q8N5Y2 521 aaKnown RBP11.12□□□□□ -0.63
CRLF3-202ENST00000577725 PHOSPHO2Q8TCD6 241 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 GDPD5Q8WTR4 605 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 CEP170P1Q96L14 293 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 SLC9A7Q96T83 725 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 BPIFA3Q9BQP9 254 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 GPRC5CQ9NQ84 441 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 ANKEF1Q9NU02 776 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 DACH1Q9UI36 760 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 PCDHA2Q9Y5H9 948 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 MAFBQ9Y5Q3 323 aaPredicted RBP11.12□□□□□ -0.63
CRLF3-202ENST00000577725 DMDP11532 3685 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 BAHCC1Q9P281 2608 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 EPG5Q9HCE0 2579 aa11.12□□□□□ -0.63
CRLF3-202ENST00000577725 FRMD3A2A2Y4 597 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 DYNC1LI2O43237 492 aaPredicted RBP11.11□□□□□ -0.63
CRLF3-202ENST00000577725 CAVIN2O95810 425 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 ASGR1P07306 291 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 PFKMP08237 780 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 MYBP10242 640 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 CST5P28325 142 aaPredicted RBP11.11□□□□□ -0.63
CRLF3-202ENST00000577725 CASP5P51878 434 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 PMS1P54277 932 aaKnown RBP11.11□□□□□ -0.63
CRLF3-202ENST00000577725 MYL5Q02045 173 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 PAK1Q13153 545 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 LAMC2Q13753 1193 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 UVSSAQ2YD98 709 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 DUSP28Q4G0W2 176 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 XKR3Q5GH77 459 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 IQSEC1Q6DN90 963 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 NELFCDQ8IXH7 590 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 FBXL6Q8N531 539 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 KCTD17Q8N5Z5 321 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 MYCT1Q8N699 235 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 PCSK9Q8NBP7 692 aaKnown RBP11.11□□□□□ -0.63
CRLF3-202ENST00000577725 GLG1Q92896 1179 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 AZI2Q9H6S1 392 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 PKD1L2Q7Z442 2459 aa11.11□□□□□ -0.63
CRLF3-202ENST00000577725 SMTNL1A8MU46 457 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 H3BQ06 376 aaPredicted RBP11.1□□□□□ -0.63
CRLF3-202ENST00000577725 DKC1O60832 514 aaKnown RBP eCLIP11.1□□□□□ -0.63
CRLF3-202ENST00000577725 LGALS2P05162 132 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 MMP3P08254 477 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 GUCY2CP25092 1073 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 NMT1P30419 496 aaKnown RBP11.1□□□□□ -0.63
CRLF3-202ENST00000577725 PLCB4Q15147 1175 aa11.1□□□□□ -0.63
CRLF3-202ENST00000577725 FAM102BQ5T8I3 360 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms