RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 PTPROQ16827 1216 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.29□□□□□ -1.24
NUP88-213ENST00000576862 ERICH6BQ5W0A0 696 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 CNTD1Q8N815 330 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 OR14C36Q8NHC7 312 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 GCDHQ92947 438 aaPredicted RBP7.29□□□□□ -1.24
NUP88-213ENST00000576862 SAMD11Q96NU1 681 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 GPHA2Q96T91 129 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 PLA2G12BQ9BX93 195 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 C12orf65Q9H3J6 166 aaKnown RBP7.29□□□□□ -1.24
NUP88-213ENST00000576862 CD248Q9HCU0 757 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 EDARQ9UNE0 448 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 CDY2AQ9Y6F7 541 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 SHROOM4Q9ULL8 1493 aa7.29□□□□□ -1.24
NUP88-213ENST00000576862 DAPK3O43293 454 aa7.28□□□□□ -1.24
NUP88-213ENST00000576862 FSBPO95073 299 aa7.28□□□□□ -1.24
NUP88-213ENST00000576862 LY86O95711 162 aa7.28□□□□□ -1.24
NUP88-213ENST00000576862 BPIFB4P59827 614 aa7.28□□□□□ -1.24
NUP88-213ENST00000576862 EFEMP1Q12805 493 aa7.28□□□□□ -1.24
NUP88-213ENST00000576862 FUKQ8N0W3 1084 aa7.28□□□□□ -1.24
NUP88-213ENST00000576862 ANKRD53Q8N9V6 530 aa7.28□□□□□ -1.24
NUP88-213ENST00000576862 RABGGTAQ92696 567 aa7.28□□□□□ -1.24
NUP88-213ENST00000576862 WWC2-AS2Q96NR7 200 aa7.28□□□□□ -1.24
NUP88-213ENST00000576862 PUS7LQ9H0K6 701 aaKnown RBP7.28□□□□□ -1.24
NUP88-213ENST00000576862 ZFR2Q9UPR6 939 aaKnown RBP7.28□□□□□ -1.24
NUP88-213ENST00000576862 A0A1W2PR48 441 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 TOX4O94842 621 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 KIR2DL3P43628 341 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 KCNK18Q7Z418 384 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 ADGRE4PQ86SQ3 457 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 UNC5BQ8IZJ1 945 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 CBARPQ8N350 705 aaPredicted RBP7.27□□□□□ -1.25
NUP88-213ENST00000576862 GIMAP8Q8ND71 665 aaPredicted RBP7.27□□□□□ -1.25
NUP88-213ENST00000576862 SHCBP1Q8NEM2 672 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 Q8TCH9 128 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 LOXL4Q96JB6 756 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 RPL10LQ96L21 214 aaKnown RBP7.27□□□□□ -1.25
NUP88-213ENST00000576862 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 QRSL1Q9H0R6 528 aaKnown RBP7.27□□□□□ -1.25
NUP88-213ENST00000576862 MSL2Q9HCI7 577 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 ST6GALNAC2Q9UJ37 374 aa7.27□□□□□ -1.25
NUP88-213ENST00000576862 NRP2O60462 931 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 VSIG10L2P0DP72 767 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 GUCY2FP51841 1108 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 MRPS9P82933 396 aaKnown RBP7.26□□□□□ -1.25
NUP88-213ENST00000576862 MGAT5Q09328 741 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 MTMR1Q13613 665 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 RIN1Q13671 783 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 INAVAQ3KP66 663 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 GAGE13Q4V321 117 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 TTC9BQ8N6N2 239 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 TSPEARQ8WU66 669 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 RAX2Q96IS3 184 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 OR14A2Q96R54 314 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 UIMC1Q96RL1 719 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 MENTQ9BUN1 341 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 BRINP2Q9C0B6 783 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 C14orf93Q9H972 538 aaKnown RBP7.26□□□□□ -1.25
NUP88-213ENST00000576862 ING3Q9NXR8 418 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 DPP7Q9UHL4 492 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 SLC30A1Q9Y6M5 507 aa7.26□□□□□ -1.25
NUP88-213ENST00000576862 B8ZZF3 427 aa7.25□□□□□ -1.25
NUP88-213ENST00000576862 RAD17O75943 681 aa7.25□□□□□ -1.25
NUP88-213ENST00000576862 XPAP23025 273 aaPredicted RBP7.25□□□□□ -1.25
NUP88-213ENST00000576862 KLF1Q13351 362 aaPredicted RBP7.25□□□□□ -1.25
NUP88-213ENST00000576862 SPIDRQ14159 915 aa7.25□□□□□ -1.25
NUP88-213ENST00000576862 FAM50AQ14320 339 aaKnown RBP7.25□□□□□ -1.25
NUP88-213ENST00000576862 TOR2AQ5JU69 321 aa7.25□□□□□ -1.25
NUP88-213ENST00000576862 MSL3Q8N5Y2 521 aaKnown RBP7.25□□□□□ -1.25
NUP88-213ENST00000576862 ZCRB1Q8TBF4 217 aaKnown RBP7.25□□□□□ -1.25
NUP88-213ENST00000576862 NELFAQ9H3P2 528 aa7.25□□□□□ -1.25
NUP88-213ENST00000576862 CCM2LQ9NUG4 571 aaPredicted RBP7.25□□□□□ -1.25
NUP88-213ENST00000576862 SMPD4Q9NXE4 827 aa7.25□□□□□ -1.25
NUP88-213ENST00000576862 MTSS1O43312 755 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 ZNF623O75123 536 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 TMEM127O75204 238 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 KATNA1O75449 491 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 JUNP05412 331 aaKnown RBP7.24□□□□□ -1.25
NUP88-213ENST00000576862 RPS19P39019 145 aaKnown RBP7.24□□□□□ -1.25
NUP88-213ENST00000576862 NRG3P56975 720 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 SRSF2Q01130 221 aaKnown RBP7.24□□□□□ -1.25
NUP88-213ENST00000576862 MUM1Q2TAK8 710 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 LCE1DQ5T752 114 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 LMBR1LQ6UX01 489 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 TAS1R1Q7RTX1 841 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 GLB1L2Q8IW92 636 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 RPUSD2Q8IZ73 545 aaKnown RBP7.24□□□□□ -1.25
NUP88-213ENST00000576862 C8orf49Q96NF6 230 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 CCDC8Q9H0W5 538 aaPredicted RBP7.24□□□□□ -1.25
NUP88-213ENST00000576862 JAG2Q9Y219 1238 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 NCANO14594 1321 aa7.24□□□□□ -1.25
NUP88-213ENST00000576862 PRRG2O14669 202 aa7.23□□□□□ -1.25
NUP88-213ENST00000576862 ALDH1A2O94788 518 aa7.23□□□□□ -1.25
NUP88-213ENST00000576862 MAGEA10P43363 369 aaPredicted RBP7.23□□□□□ -1.25
NUP88-213ENST00000576862 MTNR1BP49286 362 aa7.23□□□□□ -1.25
NUP88-213ENST00000576862 CDK17Q00537 523 aa7.23□□□□□ -1.25
NUP88-213ENST00000576862 FOXL1Q12952 345 aa7.23□□□□□ -1.25
NUP88-213ENST00000576862 Q6ZSN1 163 aa7.23□□□□□ -1.25
NUP88-213ENST00000576862 AUTS2Q8WXX7 1259 aa7.23□□□□□ -1.25
NUP88-213ENST00000576862 DNAJC28Q9NX36 388 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms