RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	AZI2	Q9H6S1	392 aa		10.92	□□□□□ -0.66
NXN-208	ENST00000575171	ZNF215	Q9UL58	517 aa	Predicted RBP	10.92	□□□□□ -0.66
NXN-208	ENST00000575171	PCDHB6	Q9Y5E3	794 aa		10.92	□□□□□ -0.66
NXN-208	ENST00000575171	GBF1	Q92538	1859 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	CARNS1	A5YM72	827 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171		H3BRB1	525 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	ARVCF	O00192	962 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	TBX3	O15119	743 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	ATXN7	O15265	892 aa	Predicted RBP	10.91	□□□□□ -0.66
NXN-208	ENST00000575171	WIPF1	O43516	503 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	F2	P00734	622 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	PSAP	P07602	524 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	OR52Z1	P0C646	297 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	SUPT20HL2	P0C7V6	817 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	HOXD8	P13378	290 aa	Predicted RBP	10.91	□□□□□ -0.66
NXN-208	ENST00000575171	JAK3	P52333	1124 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	PDE4C	Q08493	712 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	ORC2	Q13416	577 aa	Predicted RBP	10.91	□□□□□ -0.66
NXN-208	ENST00000575171	SNX17	Q15036	470 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	SHH	Q15465	462 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	KIAA0753	Q2KHM9	967 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.91	□□□□□ -0.66
NXN-208	ENST00000575171	SAMD5	Q5TGI4	173 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	FAM160B1	Q5W0V3	765 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	FAM173B	Q6P4H8	233 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.91	□□□□□ -0.66
NXN-208	ENST00000575171	MIER3	Q7Z3K6	550 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.91	□□□□□ -0.66
NXN-208	ENST00000575171	C7orf31	Q8N865	590 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	MAFA	Q8NHW3	353 aa	Predicted RBP	10.91	□□□□□ -0.66
NXN-208	ENST00000575171	KAT2B	Q92831	832 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	HAS1	Q92839	578 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	COL26A1	Q96A83	441 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	C16orf70	Q9BSU1	422 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	MKNK1	Q9BUB5	465 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	SEMA6B	Q9H3T3	888 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	SMARCAD1	Q9H4L7	1026 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	TUT1	Q9H6E5	874 aa	Known RBP	10.91	□□□□□ -0.66
NXN-208	ENST00000575171	ZNF302	Q9NR11	478 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	DISC1	Q9NRI5	854 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	GABBR1	Q9UBS5	961 aa		10.91	□□□□□ -0.66
NXN-208	ENST00000575171	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.91	□□□□□ -0.66
NXN-208	ENST00000575171	MCM3AP	O60318	1980 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	EMSY	Q7Z589	1322 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	ZSCAN22	P10073	491 aa	Predicted RBP	10.9	□□□□□ -0.66
NXN-208	ENST00000575171	SFN	P31947	248 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	STAT5B	P51692	787 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	PKP1	Q13835	747 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	GAS6	Q14393	721 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	RNFT1	Q5M7Z0	435 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	SWSAP1	Q6NVH7	229 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	ABHD15	Q6UXT9	468 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.9	□□□□□ -0.66
NXN-208	ENST00000575171	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.9	□□□□□ -0.66
NXN-208	ENST00000575171	CKAP2L	Q8IYA6	745 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	CNTNAP3B	Q96NU0	1288 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	PCYT2	Q99447	389 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	CNTNAP3	Q9BZ76	1288 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.9	□□□□□ -0.66
NXN-208	ENST00000575171	TTC12	Q9H892	705 aa	Predicted RBP	10.9	□□□□□ -0.66
NXN-208	ENST00000575171	VAV3	Q9UKW4	847 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	PCDHA12	Q9UN75	941 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	PCDHA10	Q9Y5I2	948 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	XIRP2	A4UGR9	3374 aa		10.9	□□□□□ -0.66
NXN-208	ENST00000575171	GRIN2D	O15399	1336 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	TLR3	O15455	904 aa	Known RBP	10.89	□□□□□ -0.67
NXN-208	ENST00000575171	BNIP3L	O60238	219 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	F13A1	P00488	732 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	PDIA4	P13667	645 aa	Known RBP	10.89	□□□□□ -0.67
NXN-208	ENST00000575171	TEC	P42680	631 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	SMAD3	P84022	425 aa	Known RBP	10.89	□□□□□ -0.67
NXN-208	ENST00000575171	CEBPZ	Q03701	1054 aa	Known RBP	10.89	□□□□□ -0.67
NXN-208	ENST00000575171	TLE2	Q04725	743 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	PPP2R5C	Q13362	524 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	TMEM266	Q2M3C6	531 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	MYLIP	Q8WY64	445 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	ABHD17A	Q96GS6	310 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	MYO19	Q96H55	970 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	HSH2D	Q96JZ2	352 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	SUSD3	Q96L08	255 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	MTMR9	Q96QG7	549 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.89	□□□□□ -0.67
NXN-208	ENST00000575171	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
NXN-208	ENST00000575171	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.89	□□□□□ -0.67
NXN-208	ENST00000575171	NDFIP2	Q9NV92	336 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	ERAP1	Q9NZ08	941 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	HDAC6	Q9UBN7	1215 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	PIEZO1	Q92508	2521 aa		10.89	□□□□□ -0.67
NXN-208	ENST00000575171	MROH7	Q68CQ1	1323 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	IGKV6D-21	A0A0A0MT36	114 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	C17orf102	A2RUQ5	167 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	DCDC2B	A2VCK2	349 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	DCDC2C	A8MYV0	355 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	HAS3	O00219	553 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	FAM157B	P0CG42	384 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	SMIM10L2A	P0DMW4	78 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	SMIM10L2B	P0DMW5	78 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	CDK7	P50613	346 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	IGBP1	P78318	339 aa		10.88	□□□□□ -0.67
NXN-208	ENST00000575171	PPFIA1	Q13136	1202 aa		10.88	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms