RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 HIP1RO75146 1068 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 FGRP09769 529 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 POLD1P28340 1107 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 HSPA9P38646 679 aaKnown RBP9.21□□□□□ -0.94
RPAIN-215ENST00000575112 ITIH3Q06033 890 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 RRP1BQ14684 758 aaKnown RBP9.21□□□□□ -0.94
RPAIN-215ENST00000575112 LRRC14Q15048 493 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 PPP1R7Q15435 360 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 PADI6Q6TGC4 694 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 KIF2BQ8N4N8 673 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 P2RX7Q99572 595 aaKnown RBP9.21□□□□□ -0.94
RPAIN-215ENST00000575112 TBK1Q9UHD2 729 aa9.21□□□□□ -0.94
RPAIN-215ENST00000575112 IGBP1P78318 339 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 MYL7Q01449 175 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 GIT2Q14161 759 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 RASA3Q14644 834 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 FIGNQ5HY92 759 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 ZBTB33Q86T24 672 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 CPNE8Q86YQ8 564 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 ANKRD42Q8N9B4 389 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 ZSWIM2Q8NEG5 633 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 HVCN1Q96D96 273 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 CEP170P1Q96L14 293 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 CRAMP1Q96RY5 1269 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 TEKT3Q9BXF9 490 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 TOPORSQ9NS56 1045 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-215ENST00000575112 AMFRQ9UKV5 643 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 NOC2LQ9Y3T9 749 aaKnown RBP9.2□□□□□ -0.94
RPAIN-215ENST00000575112 CCDC88AQ3V6T2 1871 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 MEIS2O14770 477 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 HNRNPDLO14979 420 aaKnown RBP9.2□□□□□ -0.94
RPAIN-215ENST00000575112 CD58P19256 250 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 PSMC2P35998 433 aaKnown RBP9.2□□□□□ -0.94
RPAIN-215ENST00000575112 KCNJ2P63252 427 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 MYO1EQ12965 1108 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 NEDD9Q14511 834 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 SNCBQ16143 134 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 GSTA5Q7RTV2 222 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 CPLX4Q7Z7G2 160 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 DNAJC19Q96DA6 116 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 LBHD1Q9BQE6 289 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-215ENST00000575112 PLCD4Q9BRC7 762 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 CBWD1Q9BRT8 395 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 ABCF3Q9NUQ8 709 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 EMSYQ7Z589 1322 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 EVI5O60447 810 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 GALCP54803 685 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 GRM1Q13255 1194 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 NAA25Q14CX7 972 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 ARSHQ5FYA8 562 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 CCT6BQ92526 530 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 RMDN3Q96TC7 470 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 TACO1Q9BSH4 297 aaKnown RBP9.2□□□□□ -0.94
RPAIN-215ENST00000575112 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-215ENST00000575112 IGSF9BQ9UPX0 1349 aa9.2□□□□□ -0.94
RPAIN-215ENST00000575112 EME2A4GXA9 379 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 CTNND1O60716 968 aaKnown RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 CSDE1O75534 798 aaKnown RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 IFNB1P01574 187 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 TNFRSF8P28908 595 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 FXR2P51116 673 aaKnown RBP eCLIP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 PPP2R2AP63151 447 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 PDIA5Q14554 519 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 SLC18A3Q16572 532 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 RINT1Q6NUQ1 792 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 STXBP4Q6ZWJ1 553 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 SLC20A1Q8WUM9 679 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 DHX38Q92620 1227 aaKnown RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 CEP72Q9P209 647 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 ASIC3Q9UHC3 531 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 TMEM59LQ9UK28 342 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 PCDHGC5Q9Y5F6 944 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 PAPPAQ13219 1627 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 ANKRD62A6NC57 917 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 HMGB1P1B2RPK0 211 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 CYP26A1O43174 497 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 KRT19P08727 400 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 ZBTB48P10074 688 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 GCFC2P16383 781 aaKnown RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 DRD4P21917 467 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 PEX19P40855 299 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 CLNS1AP54105 237 aaKnown RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 DLG4P78352 724 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 ELF3P78545 371 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 MTMR2Q13614 643 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 KIAA1755Q5JYT7 1200 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 SCARA5Q6ZMJ2 495 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 NLRX1Q86UT6 975 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 PALB2Q86YC2 1186 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 TATDN2Q93075 761 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 SGSM3Q96HU1 749 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 FNBP1Q96RU3 617 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 ISCUQ9H1K1 167 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 EPB41L4BQ9H329 900 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 TAS2R14Q9NYV8 317 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 LARSQ9P2J5 1176 aaKnown RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 MRPL11Q9Y3B7 192 aaKnown RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 FOXN3O00409 490 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 PIK3R2O00459 728 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms