RNA–Protein interactions for RNA: ENST00000574257.5

ABR-226, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-226ENST00000574257 ANKRD54Q6NXT1 300 aa13.18□□□□□ -0.3
ABR-226ENST00000574257 BCL7CQ8WUZ0 217 aaPredicted RBP13.18□□□□□ -0.3
ABR-226ENST00000574257 EDAQ92838 391 aa13.18□□□□□ -0.3
ABR-226ENST00000574257 DYDC2Q96IM9 177 aa13.18□□□□□ -0.3
ABR-226ENST00000574257 RPGRIP1Q96KN7 1286 aa13.18□□□□□ -0.3
ABR-226ENST00000574257 CEP170P1Q96L14 293 aa13.18□□□□□ -0.3
ABR-226ENST00000574257 INO80BQ9C086 356 aaPredicted RBP13.18□□□□□ -0.3
ABR-226ENST00000574257 DHX33Q9H6R0 707 aaKnown RBP13.18□□□□□ -0.3
ABR-226ENST00000574257 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
ABR-226ENST00000574257 BMP2KQ9NSY1 1161 aaPredicted RBP13.18□□□□□ -0.3
ABR-226ENST00000574257 PIN4Q9Y237 131 aaKnown RBP13.18□□□□□ -0.3
ABR-226ENST00000574257 WNT7AO00755 349 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 TBX3O15119 743 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 B4GALT3O60512 393 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 SLITRK3O94933 977 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 CXCL14O95715 111 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 GALTP07902 379 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 SRGAP2CP0DJJ0 459 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 SFPQP23246 707 aaKnown RBP eCLIP13.17□□□□□ -0.3
ABR-226ENST00000574257 HOXA11P31270 313 aaPredicted RBP13.17□□□□□ -0.3
ABR-226ENST00000574257 ALDH7A1P49419 539 aaKnown RBP13.17□□□□□ -0.3
ABR-226ENST00000574257 AFF1P51825 1210 aaKnown RBP13.17□□□□□ -0.3
ABR-226ENST00000574257 ANAPC15P60006 121 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 LAMTOR4Q0VGL1 99 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 CTTNQ14247 550 aaKnown RBP13.17□□□□□ -0.3
ABR-226ENST00000574257 NCAPH2Q6IBW4 605 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 CATSPER4Q7RTX7 472 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 C4orf19Q8IY42 314 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 AUTS2Q8WXX7 1259 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
ABR-226ENST00000574257 LXNQ9BS40 222 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 FAM105AQ9NUU6 356 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
ABR-226ENST00000574257 CLASP2O75122 1294 aaKnown RBP13.16□□□□□ -0.3
ABR-226ENST00000574257 XBP1P17861 261 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 YWHABP31946 246 aaKnown RBP13.16□□□□□ -0.3
ABR-226ENST00000574257 SMC1AQ14683 1233 aaKnown RBP13.16□□□□□ -0.3
ABR-226ENST00000574257 NOMO2Q5JPE7 1267 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 KANK3Q6NY19 840 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 AGMOQ6ZNB7 445 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 MRPL10Q7Z7H8 261 aaKnown RBP13.16□□□□□ -0.3
ABR-226ENST00000574257 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 FEZF2Q8TBJ5 459 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 VN1R3Q9BXE9 311 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 MRPL9Q9BYD2 267 aaKnown RBP13.16□□□□□ -0.3
ABR-226ENST00000574257 XPNPEP1Q9NQW7 623 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 AGPAT5Q9NUQ2 364 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 TBC1D13Q9NVG8 400 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 DNAJB4Q9UDY4 337 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 INPP5FQ9Y2H2 1132 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 PCDHB2Q9Y5E7 798 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 CACNA1HO95180 2353 aa13.16□□□□□ -0.3
ABR-226ENST00000574257 A0A087WWV3 80 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 FSD2A1L4K1 749 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 BTBD18B2RXH4 712 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 MARCH6O60337 910 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 JAK2O60674 1132 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 DKC1O60832 514 aaKnown RBP eCLIP13.15□□□□□ -0.3
ABR-226ENST00000574257 ZC3H11AO75152 810 aaKnown RBP eCLIP13.15□□□□□ -0.3
ABR-226ENST00000574257 DDHD2O94830 711 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 SEC24BO95487 1268 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 SKIP12755 728 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 KRT2P35908 639 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 SLC11A1P49279 550 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 POLGP54098 1239 aaPredicted RBP13.15□□□□□ -0.3
ABR-226ENST00000574257 ZXDAP98168 799 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 CYP4A11Q02928 519 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 ST3GAL1Q11201 340 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 ANKRD1Q15327 319 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 XKR9Q5GH70 373 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 GLB1LQ6UWU2 654 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 TRIM67Q6ZTA4 783 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 SRGAP1Q7Z6B7 1085 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 TPH2Q8IWU9 490 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 NSUN7Q8NE18 718 aaKnown RBP13.15□□□□□ -0.3
ABR-226ENST00000574257 PSPC1Q8WXF1 523 aaKnown RBP13.15□□□□□ -0.3
ABR-226ENST00000574257 SLC7A3Q8WY07 619 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 GTF3C6Q969F1 213 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 TMEM169Q96HH4 297 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 IGSF21Q96ID5 467 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 HSD17B14Q9BPX1 270 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 EIF2AK1Q9BQI3 630 aaKnown RBP13.15□□□□□ -0.3
ABR-226ENST00000574257 ZSWIM4Q9H7M6 989 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 HCFC2Q9Y5Z7 792 aa13.15□□□□□ -0.3
ABR-226ENST00000574257 TMEM221A6NGB7 291 aa13.14□□□□□ -0.31
ABR-226ENST00000574257 M0R296 226 aa13.14□□□□□ -0.31
ABR-226ENST00000574257 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
ABR-226ENST00000574257 HOXB8P17481 243 aaPredicted RBP13.14□□□□□ -0.31
ABR-226ENST00000574257 RFC5P40937 340 aa13.14□□□□□ -0.31
ABR-226ENST00000574257 FOSBP53539 338 aa13.14□□□□□ -0.31
ABR-226ENST00000574257 EMC2Q15006 297 aa13.14□□□□□ -0.31
ABR-226ENST00000574257 OTUD6AQ7L8S5 288 aa13.14□□□□□ -0.31
ABR-226ENST00000574257 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
ABR-226ENST00000574257 DDX53Q86TM3 631 aaKnown RBP13.14□□□□□ -0.31
ABR-226ENST00000574257 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
ABR-226ENST00000574257 SLFN12Q8IYM2 578 aa13.14□□□□□ -0.31
ABR-226ENST00000574257 C12orf76Q8N812 135 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms