RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 PDPK1O15530 556 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 KINO60870 393 aaKnown RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 RSPH10BP0C881 870 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 UBTFL1P0CB47 393 aaPredicted RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 SP9P0CG40 484 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 HOXB8P17481 243 aaPredicted RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 CTSOP43234 321 aaPredicted RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 ZNF200P98182 395 aaPredicted RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 KLRC3Q07444 240 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 SQSTM1Q13501 440 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 PPP2R5BQ15173 497 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 DDR2Q16832 855 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 ZNF528Q3MIS6 628 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 SEZ6Q53EL9 994 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 CCDC158Q5M9N0 1113 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 LRSAM1Q6UWE0 723 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 WDR63Q8IWG1 891 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 RPAP2Q8IXW5 612 aaPredicted RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 LRRC47Q8N1G4 583 aaKnown RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 SCFD2Q8WU76 684 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 POF1BQ8WVV4 589 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 DDX1Q92499 740 aaKnown RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 KIFC2Q96AC6 838 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 ZNF689Q96CS4 500 aaPredicted RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 KATNAL1Q9BW62 490 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 TLE6Q9H808 572 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 POLMQ9NP87 494 aaPredicted RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 PIH1D3Q9NQM4 214 aaKnown RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 HOMER2Q9NSB8 354 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 RNF146Q9NTX7 359 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 DZANK1Q9NVP4 752 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 CYP39A1Q9NYL5 469 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 NAV2Q8IVL1 2488 aa6.07□□□□□ -1.44
TRIM25-208ENST00000574234 DSPP15924 2871 aaKnown RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 HELZ2Q9BYK8 2649 aaKnown RBP6.07□□□□□ -1.44
TRIM25-208ENST00000574234 A0A1B0GTH6 734 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 C2CD4DB7Z1M9 353 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 J3QL48 77 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 ENC1O14682 589 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 MMP20O60882 483 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 CAND2O75155 1236 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 SASH3O75995 380 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 NDUFB10O96000 172 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 ITGB1P05556 798 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 TGM1P22735 817 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 MASP1P48740 699 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 ALDH5A1P51649 535 aaPredicted RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 RPS26P62854 115 aaKnown RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 UBE3AQ05086 875 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 TBC1D8BQ0IIM8 1120 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 IFRD2Q12894 506 aaPredicted RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 BTG3Q14201 252 aaPredicted RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 DUSP6Q16828 381 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 TTC39AQ5SRH9 613 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 TTBK2Q6IQ55 1244 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 ANKRD54Q6NXT1 300 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 C16orf86Q6ZW13 317 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 RBM23Q86U06 439 aaKnown RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 DHX37Q8IY37 1157 aaKnown RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 C7orf31Q8N865 590 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 VN1R2Q8NFZ6 395 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 FBXO27Q8NI29 283 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 NETO1Q8TDF5 533 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 KAT2BQ92831 832 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 WNT8BQ93098 351 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 TRERF1Q96PN7 1200 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 NUP88Q99567 741 aaPredicted RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 CRNKL1Q9BZJ0 848 aaKnown RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 ZCCHC2Q9C0B9 1178 aaKnown RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 ERVK-5Q9HDB9 667 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 BRD7Q9NPI1 651 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 DCP1AQ9NPI6 582 aaPredicted RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 ST7Q9NRC1 585 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 HDAC6Q9UBN7 1215 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 SYNPO2Q9UMS6 1093 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 DUSP12Q9UNI6 340 aa6.06□□□□□ -1.44
TRIM25-208ENST00000574234 DDX49Q9Y6V7 483 aaKnown RBP6.06□□□□□ -1.44
TRIM25-208ENST00000574234 MYH15Q9Y2K3 1946 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 HAS3O00219 553 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 IDH1O75874 414 aaKnown RBP6.05□□□□□ -1.44
TRIM25-208ENST00000574234 DGKIO75912 1065 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 CSPG5O95196 566 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 F2P00734 622 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 ASGR2P07307 311 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 MMP3P08254 477 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 ARP10275 920 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 CASTP20810 708 aaKnown RBP6.05□□□□□ -1.44
TRIM25-208ENST00000574234 SP100P23497 879 aaPredicted RBP6.05□□□□□ -1.44
TRIM25-208ENST00000574234 ITPKAP23677 461 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 GRIA4P48058 902 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 CDK8P49336 464 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 ITIH3Q06033 890 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 MTX1Q13505 466 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 SAMD5Q5TGI4 173 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 SYCE2Q6PIF2 218 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 PRICKLE2Q7Z3G6 844 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 SERINC5Q86VE9 423 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 C1orf210Q8IVY1 113 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 TRIM42Q8IWZ5 723 aa6.05□□□□□ -1.44
TRIM25-208ENST00000574234 TDRD5Q8NAT2 981 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms