RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SETQ01105 290 aaPredicted RBP20.61■□□□□ 0.89
SCARF1-206ENST00000573852 PPP2R5EQ16537 467 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 LRCH2Q5VUJ6 765 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 TMEM179Q6ZVK1 233 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 BANK1Q8NDB2 785 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 C18orf8Q96DM3 657 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 ZDHHC15Q96MV8 337 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 PABPC3Q9H361 631 aaKnown RBP20.61■□□□□ 0.89
SCARF1-206ENST00000573852 CNOT10Q9H9A5 744 aaKnown RBP20.61■□□□□ 0.89
SCARF1-206ENST00000573852 PTGIRP43119 386 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 MARCKSL1P49006 195 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 MAPK7Q13164 816 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 DHX34Q14147 1143 aaKnown RBP20.61■□□□□ 0.89
SCARF1-206ENST00000573852 UBAP2Q5T6F2 1119 aaKnown RBP20.61■□□□□ 0.89
SCARF1-206ENST00000573852 GKAP1Q5VSY0 366 aaPredicted RBP20.61■□□□□ 0.89
SCARF1-206ENST00000573852 KCTD17Q8N5Z5 321 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 LMO3Q8TAP4 145 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 KRT35Q92764 455 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 AGPAT1Q99943 283 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 CCDC172P0C7W6 258 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 BMP3P12645 472 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 KRT13P13646 458 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 ZNF131P52739 623 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 PPP2R5AQ15172 486 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 HOOK3Q86VS8 718 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 KIAA0825Q8IV33 1275 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 NEK9Q8TD19 979 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 HOOK2Q96ED9 719 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 GRHL1Q9NZI5 618 aa20.61■□□□□ 0.89
SCARF1-206ENST00000573852 ABCB5Q2M3G0 1257 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 ODR4Q5SWX8 454 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 CCDC91Q7Z6B0 441 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 ZDHHC14Q8IZN3 488 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 NCAPGQ9BPX3 1015 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 TLDC2A0PJX2 215 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 CHN1P15882 459 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 DRG2P55039 364 aaKnown RBP20.6■□□□□ 0.89
SCARF1-206ENST00000573852 BFSP1Q12934 665 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 ARMC9Q7Z3E5 817 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 SPICE1Q8N0Z3 855 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 PRELID2Q8N945 189 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 CENPTQ96BT3 561 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 CHMP6Q96FZ7 201 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 JPH2Q9BR39 696 aaPredicted RBP20.6■□□□□ 0.89
SCARF1-206ENST00000573852 FAM129AQ9BZQ8 928 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 ADAM7Q9H2U9 754 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 SEL1LQ9UBV2 794 aa20.6■□□□□ 0.89
SCARF1-206ENST00000573852 RPTORQ8N122 1335 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 G3V3G9 751 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 PIK3CDO00329 1044 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 CTNND1O60716 968 aaKnown RBP20.59■□□□□ 0.89
SCARF1-206ENST00000573852 UBXN2AP68543 259 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 DLG4P78352 724 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 PPP2R5CQ13362 524 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 SLC29A2Q14542 456 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 DCAF8Q5TAQ9 597 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 CTTNBP2NLQ9P2B4 639 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 CHORDC1Q9UHD1 332 aaPredicted RBP20.59■□□□□ 0.89
SCARF1-206ENST00000573852 PRR12Q9ULL5 1215 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 TMEM110-MUSTN1A8MSY1 372 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 EXOC3O60645 756 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 ATP2C2O75185 946 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 FTLP02792 175 aaPredicted RBP20.59■□□□□ 0.89
SCARF1-206ENST00000573852 RPL21P46778 160 aaKnown RBP20.59■□□□□ 0.89
SCARF1-206ENST00000573852 SCTRP47872 440 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 LACTB2Q53H82 288 aaPredicted RBP20.59■□□□□ 0.89
SCARF1-206ENST00000573852 DENND2CQ68D51 928 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 TTC27Q6P3X3 843 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 RHOT2Q8IXI1 618 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 CCT6BQ92526 530 aa20.59■□□□□ 0.89
SCARF1-206ENST00000573852 UBE4BO95155 1302 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 THSD7AQ9UPZ6 1657 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 SMIM23A6NLE4 172 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 PHF2O75151 1096 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 CFBP00751 764 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 RBM5P52756 815 aaKnown RBP eCLIP20.58■□□□□ 0.89
SCARF1-206ENST00000573852 HADHBP55084 474 aaKnown RBP20.58■□□□□ 0.89
SCARF1-206ENST00000573852 GSCP56915 257 aaPredicted RBP20.58■□□□□ 0.89
SCARF1-206ENST00000573852 IFI35P80217 286 aaPredicted RBP20.58■□□□□ 0.89
SCARF1-206ENST00000573852 BTNL9Q6UXG8 535 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 SLC5A5Q92911 643 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 ZKSCAN4Q969J2 545 aaPredicted RBP20.58■□□□□ 0.89
SCARF1-206ENST00000573852 PGM2Q96G03 612 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 ZNF317Q96PQ6 595 aaPredicted RBP20.58■□□□□ 0.89
SCARF1-206ENST00000573852 SEMA4AQ9H3S1 761 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 DBNDD1Q9H9R9 158 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 UBE2TQ9NPD8 197 aaPredicted RBP20.58■□□□□ 0.89
SCARF1-206ENST00000573852 HAUS2Q9NVX0 235 aa20.58■□□□□ 0.89
SCARF1-206ENST00000573852 A0A1W2PRG0 241 aa20.58■□□□□ 0.88
SCARF1-206ENST00000573852 PRELPP51888 382 aa20.58■□□□□ 0.88
SCARF1-206ENST00000573852 ARHGEF19Q8IW93 802 aa20.58■□□□□ 0.88
SCARF1-206ENST00000573852 SELENOSQ9BQE4 189 aa20.58■□□□□ 0.88
SCARF1-206ENST00000573852 IDI2Q9BXS1 227 aa20.58■□□□□ 0.88
SCARF1-206ENST00000573852 AZI2Q9H6S1 392 aa20.58■□□□□ 0.88
SCARF1-206ENST00000573852 A1CFQ9NQ94 594 aaKnown RBP20.58■□□□□ 0.88
SCARF1-206ENST00000573852 MYH11P35749 1972 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 GH2P01242 217 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 MMP13P45452 471 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 CDR1P51861 262 aa20.57■□□□□ 0.88
SCARF1-206ENST00000573852 FMNL3Q8IVF7 1028 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms