RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.27	□□□□□ -0.29
ABR-222	ENST00000573667	ARHGEF35	A5YM69	484 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	INO80B-WBP1	J3KQ70	363 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	FGF18	O76093	207 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	BMP1	P13497	986 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	KCNA5	P22460	613 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	AXL	P30530	894 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	PPM1A	P35813	382 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	CCT6A	P40227	531 aa	Known RBP	13.27	□□□□□ -0.29
ABR-222	ENST00000573667	POU5F1B	Q06416	359 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	PDIA5	Q14554	519 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	LARP1B	Q659C4	914 aa	Known RBP	13.27	□□□□□ -0.29
ABR-222	ENST00000573667	POTEG	Q6S5H5	508 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	MAEA	Q7L5Y9	396 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	ZNF598	Q86UK7	904 aa	Known RBP	13.27	□□□□□ -0.29
ABR-222	ENST00000573667	MCPH1	Q8NEM0	835 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	SPPL3	Q8TCT6	385 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	MICAL1	Q8TDZ2	1067 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	PABPC5	Q96DU9	382 aa	Known RBP	13.27	□□□□□ -0.29
ABR-222	ENST00000573667	ZNF558	Q96NG5	402 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	CWH43	Q9H720	699 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	CLDND1	Q9NY35	253 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	PUF60	Q9UHX1	559 aa	Known RBP	13.27	□□□□□ -0.29
ABR-222	ENST00000573667	MYH15	Q9Y2K3	1946 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	MYO7A	Q13402	2215 aa		13.27	□□□□□ -0.29
ABR-222	ENST00000573667	TNFRSF10A	O00220	468 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	ATF7	P17544	494 aa	Predicted RBP	13.26	□□□□□ -0.29
ABR-222	ENST00000573667	ARL2	P36404	184 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	PRPH	P41219	470 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	TOB1	P50616	345 aa	Predicted RBP	13.26	□□□□□ -0.29
ABR-222	ENST00000573667	PTEN	P60484	403 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	KRT17	Q04695	432 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	CAPS	Q13938	189 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	LONRF3	Q496Y0	759 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	CLLU1OS	Q5K130	101 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	KRT79	Q5XKE5	535 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	KCNT2	Q6UVM3	1135 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	GLB1L	Q6UWU2	654 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	DTHD1	Q6ZMT9	781 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	C4orf32	Q8N8J7	132 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	SNX29	Q8TEQ0	813 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	BACH2	Q9BYV9	841 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.26	□□□□□ -0.29
ABR-222	ENST00000573667	IGFLR1	Q9H665	355 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	MINDY3	Q9H8M7	445 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	TLR9	Q9NR96	1032 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	RNF19A	Q9NV58	838 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	HCST	Q9UBK5	93 aa		13.26	□□□□□ -0.29
ABR-222	ENST00000573667	XIRP2	A4UGR9	3374 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	CARNS1	A5YM72	827 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	LRRIQ4	A6NIV6	560 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	ZNF623	O75123	536 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	GLRA2	P23416	452 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	DNAJB1	P25685	340 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	ALDH7A1	P49419	539 aa	Known RBP	13.25	□□□□□ -0.29
ABR-222	ENST00000573667	RNASEL	Q05823	741 aa	Known RBP	13.25	□□□□□ -0.29
ABR-222	ENST00000573667	PUS10	Q3MIT2	529 aa	Known RBP	13.25	□□□□□ -0.29
ABR-222	ENST00000573667	LEXM	Q3ZCV2	418 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	PDE12	Q6L8Q7	609 aa	Known RBP	13.25	□□□□□ -0.29
ABR-222	ENST00000573667	NOTUM	Q6P988	496 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	PADI6	Q6TGC4	694 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	LRRC55	Q6ZSA7	311 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.25	□□□□□ -0.29
ABR-222	ENST00000573667	ZBTB8OS	Q8IWT0	167 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	CNNM3	Q8NE01	707 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	URGCP	Q8TCY9	931 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	ASAP3	Q8TDY4	903 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	LPP	Q93052	612 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	NFKBIZ	Q9BYH8	718 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	TRIM6	Q9C030	488 aa	Predicted RBP	13.25	□□□□□ -0.29
ABR-222	ENST00000573667	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.25	□□□□□ -0.29
ABR-222	ENST00000573667	KIAA1024	Q9UPX6	916 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	FAM50B	Q9Y247	325 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	INPP5F	Q9Y2H2	1132 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	PCDHB2	Q9Y5E7	798 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	BRWD1	Q9NSI6	2320 aa		13.25	□□□□□ -0.29
ABR-222	ENST00000573667	CNTNAP2	Q9UHC6	1331 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	TRIP11	Q15643	1979 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	TSPAN1	O60635	241 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	IRS1	P35568	1242 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	PLCB3	Q01970	1234 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	HYAL1	Q12794	435 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	CAMK1	Q14012	370 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	BMS1	Q14692	1282 aa	Known RBP	13.24	□□□□□ -0.29
ABR-222	ENST00000573667	NOMO2	Q5JPE7	1267 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	HACE1	Q8IYU2	909 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	IGSF22	Q8N9C0	903 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	MRPS27	Q92552	414 aa	Known RBP	13.24	□□□□□ -0.29
ABR-222	ENST00000573667	CCDC51	Q96ER9	411 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	FAM193B	Q96PV7	902 aa	Predicted RBP	13.24	□□□□□ -0.29
ABR-222	ENST00000573667	RSAD1	Q9HA92	442 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	UBN1	Q9NPG3	1134 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	GPRC5C	Q9NQ84	441 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	DDX19A	Q9NUU7	478 aa	Known RBP	13.24	□□□□□ -0.29
ABR-222	ENST00000573667	SPG21	Q9NZD8	308 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	LZTS1	Q9Y250	596 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667		A0A0C4DFX4	3053 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	VCAN	P13611	3396 aa		13.24	□□□□□ -0.29
ABR-222	ENST00000573667	FSD2	A1L4K1	749 aa		13.23	□□□□□ -0.29
ABR-222	ENST00000573667		H3BQ06	376 aa	Predicted RBP	13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms