RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ICAM4Q14773 271 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 TCTN3Q6NUS6 607 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 TAX1BP1Q86VP1 789 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 LOXL4Q96JB6 756 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 WDR92Q96MX6 357 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 SOX7Q9BT81 388 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 CD248Q9HCU0 757 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 SMPD4Q9NXE4 827 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 DNAI1Q9UI46 699 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 TMPRSS11EQ9UL52 423 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 EPRSP07814 1512 aaKnown RBP6.48□□□□□ -1.37
CDC27-215ENST00000573550 MYPNQ86TC9 1320 aa6.48□□□□□ -1.37
CDC27-215ENST00000573550 KIAA0556O60303 1618 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 ROCK1Q13464 1354 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 SBNO2Q9Y2G9 1366 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 MAGI3Q5TCQ9 1506 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.47□□□□□ -1.37
CDC27-215ENST00000573550 PRSS38A1L453 326 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 C2orf78A6NCI8 922 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 CCER2I3L3R5 266 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 FOXS1O43638 330 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 CDC14BO60729 498 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 H2AFYO75367 372 aaKnown RBP6.47□□□□□ -1.37
CDC27-215ENST00000573550 ULK1O75385 1050 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 PCDH8O95206 1070 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 STAT4Q14765 748 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 SPATS1Q496A3 300 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 LHFPL2Q6ZUX7 228 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 HDGFL2Q7Z4V5 671 aaPredicted RBP6.47□□□□□ -1.37
CDC27-215ENST00000573550 PRRT2Q7Z6L0 340 aaPredicted RBP6.47□□□□□ -1.37
CDC27-215ENST00000573550 LPPQ93052 612 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 GFM2Q969S9 779 aaKnown RBP6.47□□□□□ -1.37
CDC27-215ENST00000573550 FERMT2Q96AC1 680 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 NOL10Q9BSC4 688 aaKnown RBP6.47□□□□□ -1.37
CDC27-215ENST00000573550 MSL2Q9HCI7 577 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 PUF60Q9UHX1 559 aaKnown RBP6.47□□□□□ -1.37
CDC27-215ENST00000573550 IFT140Q96RY7 1462 aa6.47□□□□□ -1.37
CDC27-215ENST00000573550 ADGBQ8N7X0 1667 aa6.46□□□□□ -1.37
CDC27-215ENST00000573550 ST20-MTHFSA0A0A6YYL1 179 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 PMS2P1A4D2B8 440 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 MAFGO15525 162 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 CNGA1P29973 690 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 MAGEA10P43363 369 aaPredicted RBP6.46□□□□□ -1.38
CDC27-215ENST00000573550 SESN3P58005 492 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 ADAM8P78325 824 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 PDCD1Q15116 288 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 CLEC14AQ86T13 490 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 GPR135Q8IZ08 494 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 CDYL2Q8N8U2 506 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 PPP1R14CQ8TAE6 165 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 SLC7A6OSQ96CW6 309 aaPredicted RBP6.46□□□□□ -1.38
CDC27-215ENST00000573550 C8orf49Q96NF6 230 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 WWC2-AS2Q96NR7 200 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 PLA2G12BQ9BX93 195 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 TOPORSQ9NS56 1045 aaPredicted RBP6.46□□□□□ -1.38
CDC27-215ENST00000573550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.46□□□□□ -1.381e-7■■■□□ 17.7
CDC27-215ENST00000573550 ST6GALNAC2Q9UJ37 374 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.46□□□□□ -1.38
CDC27-215ENST00000573550 NOC2LQ9Y3T9 749 aaKnown RBP6.46□□□□□ -1.38
CDC27-215ENST00000573550 PCDHB6Q9Y5E3 794 aa6.46□□□□□ -1.38
CDC27-215ENST00000573550 CROCC2H7BZ55 1655 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 PTPRKQ15262 1439 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 SLC26A4O43511 780 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 RAB11FIP3O75154 756 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 HNRNPLP14866 589 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDC27-215ENST00000573550 ADCY7P51828 1080 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 NFKB2Q00653 900 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 SAFB2Q14151 953 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDC27-215ENST00000573550 ZNF662Q6ZS27 426 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 LYSMD2Q8IV50 215 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 SLC41A1Q8IVJ1 513 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 FUKQ8N0W3 1084 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 GIMAP8Q8ND71 665 aaPredicted RBP6.45□□□□□ -1.38
CDC27-215ENST00000573550 Q8TCH9 128 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 HIST1H2AHQ96KK5 128 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 HIST1H2AJQ99878 128 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 ANO3Q9BYT9 981 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 OSBPL6Q9BZF3 934 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 WNT8AQ9H1J5 351 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 C12orf65Q9H3J6 166 aaKnown RBP6.45□□□□□ -1.38
CDC27-215ENST00000573550 PRDM12Q9H4Q4 367 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 SPC25Q9HBM1 224 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 SYNPO2Q9UMS6 1093 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 ZFR2Q9UPR6 939 aaKnown RBP6.45□□□□□ -1.38
CDC27-215ENST00000573550 RBM8AQ9Y5S9 174 aaKnown RBP6.45□□□□□ -1.38
CDC27-215ENST00000573550 SLC30A1Q9Y6M5 507 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 NUMBLQ9Y6R0 609 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 KIAA0586Q9BVV6 1533 aa6.45□□□□□ -1.38
CDC27-215ENST00000573550 TONSLQ96HA7 1378 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 RAPGEF6Q8TEU7 1601 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 GPR39O43194 453 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 DNAJC6O75061 913 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 SEC24DO94855 1032 aaPredicted RBP6.44□□□□□ -1.38
CDC27-215ENST00000573550 CLEC2LP0C7M8 214 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 ADAM17P78536 824 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 TMPRSS15P98073 1019 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 ATP2C1P98194 919 aaPredicted RBP6.44□□□□□ -1.38
CDC27-215ENST00000573550 TCIRG1Q13488 830 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 FAM50AQ14320 339 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms