RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 XRRA1Q6P2D8 792 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 SCFD2Q8WU76 684 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 AGPAT3Q9NRZ7 376 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 NRBP2Q9NSY0 501 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 AKR1B10O60218 316 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 KRT13P13646 458 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 ATP4AP20648 1035 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 ACOT2P49753 483 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 CT47A1Q5JQC4 288 aaPredicted RBP15.19■□□□□ 0.02
TVP23A-207ENST00000573360 METTL7BQ6UX53 244 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 B3GNT9Q6UX72 402 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 ZBTB45Q96K62 511 aaPredicted RBP15.19■□□□□ 0.02
TVP23A-207ENST00000573360 LIG4P49917 911 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 FAM160B1Q5W0V3 765 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 RNF149Q8NC42 400 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 NPLOC4Q8TAT6 608 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 ABHD10Q9NUJ1 306 aa15.19■□□□□ 0.02
TVP23A-207ENST00000573360 SYNGAP1Q96PV0 1343 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 ANKRD63C9JTQ0 380 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 ZMYND10O75800 440 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 OR8K1Q8NGG5 319 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 FAM213AQ9BRX8 229 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 ARHGAP39Q9C0H5 1083 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 ABCB6Q9NP58 842 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 AKT3Q9Y243 479 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 PHIPQ8WWQ0 1821 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 ASB14A6NK59 587 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 SOCS7O14512 581 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 RASAL3Q86YV0 1011 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 CBWD2Q8IUF1 395 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 ACCSQ96QU6 501 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 HDAC6Q9UBN7 1215 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 EPN1Q9Y6I3 576 aaPredicted RBP15.18■□□□□ 0.02
TVP23A-207ENST00000573360 MACROD2A1Z1Q3 448 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 TMCO5BA8MYB1 307 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 K7ERI5 159 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
TVP23A-207ENST00000573360 CDR1P51861 262 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 BEX3Q00994 111 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 STRN3Q13033 797 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 CRHR2Q13324 411 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 GOLGA6L1Q8N7Z2 621 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 FGD4Q96M96 766 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 TARS2Q9BW92 718 aaKnown RBP15.18■□□□□ 0.02
TVP23A-207ENST00000573360 XPNPEP1Q9NQW7 623 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 ODF2LQ9ULJ1 636 aa15.18■□□□□ 0.02
TVP23A-207ENST00000573360 MKI67P46013 3256 aaKnown RBP15.17■□□□□ 0.02
TVP23A-207ENST00000573360 LRRC53A6NM62 1247 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 DKC1O60832 514 aaKnown RBP eCLIP15.17■□□□□ 0.02
TVP23A-207ENST00000573360 SRGAP2O75044 1071 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 DGAT1O75907 488 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 DLG4P78352 724 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 VTI1AQ96AJ9 217 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 TOPORSQ9NS56 1045 aaPredicted RBP15.17■□□□□ 0.02
TVP23A-207ENST00000573360 RNF19AQ9NV58 838 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 GCNT4Q9P109 453 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 PDXKO00764 312 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 GUCY2CP25092 1073 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 PSMC2P35998 433 aaKnown RBP15.17■□□□□ 0.02
TVP23A-207ENST00000573360 EXOC3L4Q17RC7 722 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 PRPF31Q8WWY3 499 aaKnown RBP15.17■□□□□ 0.02
TVP23A-207ENST00000573360 PNKPQ96T60 521 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 TSKSQ9UJT2 592 aa15.17■□□□□ 0.02
TVP23A-207ENST00000573360 TRPA1O75762 1119 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 MAP2K1Q02750 393 aaPredicted RBP15.16■□□□□ 0.02
TVP23A-207ENST00000573360 CELF3Q5SZQ8 465 aaKnown RBP15.16■□□□□ 0.02
TVP23A-207ENST00000573360 RSRC2Q7L4I2 434 aaKnown RBP15.16■□□□□ 0.02
TVP23A-207ENST00000573360 HDXQ7Z353 690 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 OR6J1Q8NGC5 347 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 ASAP3Q8TDY4 903 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 CCDC42Q96M95 316 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 PCYT2Q99447 389 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 OLFML3Q9NRN5 406 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 ADGRA3Q8IWK6 1321 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 DICER1Q9UPY3 1922 aaKnown RBP15.16■□□□□ 0.02
TVP23A-207ENST00000573360 CCDC151A5D8V7 595 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 ZCWPW2Q504Y3 356 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 FUT8Q9BYC5 575 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 COL11A1P12107 1806 aaPredicted RBP15.16■□□□□ 0.02
TVP23A-207ENST00000573360 AFPP02771 609 aaKnown RBP15.16■□□□□ 0.02
TVP23A-207ENST00000573360 VTNP04004 478 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 FKBP1BP68106 108 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 BIRC3Q13489 604 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 BRD3Q15059 726 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 FAM47CQ5HY64 1035 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 ANKRD23Q86SG2 305 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 THNSL1Q8IYQ7 743 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 PSMB7Q99436 277 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 HSPBP1Q9NZL4 362 aa15.16■□□□□ 0.02
TVP23A-207ENST00000573360 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.16■□□□□ 0.02
TVP23A-207ENST00000573360 FRMD3A2A2Y4 597 aa15.15■□□□□ 0.02
TVP23A-207ENST00000573360 CAPN2P17655 700 aa15.15■□□□□ 0.02
TVP23A-207ENST00000573360 TNNI1P19237 187 aa15.15■□□□□ 0.02
TVP23A-207ENST00000573360 FGFR4P22455 802 aa15.15■□□□□ 0.02
TVP23A-207ENST00000573360 LEKR1Q6ZMV7 388 aa15.15■□□□□ 0.02
TVP23A-207ENST00000573360 TXLNBQ8N3L3 684 aa15.15■□□□□ 0.02
TVP23A-207ENST00000573360 SAMD3Q8N6K7 520 aa15.15■□□□□ 0.02
TVP23A-207ENST00000573360 ZNF507Q8TCN5 953 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms