RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SEPT9Q9UHD8 586 aaPredicted RBP22.37■■□□□ 1.17
CCDC40-206ENST00000572083 DUSP12Q9UNI6 340 aa22.37■■□□□ 1.17
CCDC40-206ENST00000572083 ZNF292O60281 2723 aa22.36■■□□□ 1.17
CCDC40-206ENST00000572083 A0A087WZ62 844 aa22.36■■□□□ 1.17
CCDC40-206ENST00000572083 GAS7O60861 476 aa22.36■■□□□ 1.17
CCDC40-206ENST00000572083 PPFIBP1Q86W92 1011 aa22.36■■□□□ 1.17
CCDC40-206ENST00000572083 CCDC12Q8WUD4 166 aaPredicted RBP22.36■■□□□ 1.17
CCDC40-206ENST00000572083 FDXACB1Q9BRP7 624 aaPredicted RBP22.36■■□□□ 1.17
CCDC40-206ENST00000572083 TRAIPQ9BWF2 469 aa22.36■■□□□ 1.17
CCDC40-206ENST00000572083 KCNK12Q9HB15 430 aa22.36■■□□□ 1.17
CCDC40-206ENST00000572083 FAM105AQ9NUU6 356 aa22.36■■□□□ 1.17
CCDC40-206ENST00000572083 NARSO43776 548 aaKnown RBP22.35■■□□□ 1.17
CCDC40-206ENST00000572083 KLRC2P26717 231 aa22.35■■□□□ 1.17
CCDC40-206ENST00000572083 CLCN4P51793 760 aa22.35■■□□□ 1.17
CCDC40-206ENST00000572083 TARBP2Q15633 366 aaKnown RBP22.35■■□□□ 1.17
CCDC40-206ENST00000572083 LRCH2Q5VUJ6 765 aa22.35■■□□□ 1.17
CCDC40-206ENST00000572083 ZNF280BQ86YH2 543 aa22.35■■□□□ 1.17
CCDC40-206ENST00000572083 RASEFQ8IZ41 740 aa22.35■■□□□ 1.17
CCDC40-206ENST00000572083 DTWD2Q8NBA8 298 aa22.35■■□□□ 1.17
CCDC40-206ENST00000572083 RSPH1Q8WYR4 309 aa22.35■■□□□ 1.17
CCDC40-206ENST00000572083 CCDC136Q96JN2 1154 aa22.35■■□□□ 1.17
CCDC40-206ENST00000572083 KLHL5Q96PQ7 755 aa22.35■■□□□ 1.17
CCDC40-206ENST00000572083 CARNS1A5YM72 827 aa22.34■■□□□ 1.17
CCDC40-206ENST00000572083 OFD1O75665 1012 aa22.34■■□□□ 1.17
CCDC40-206ENST00000572083 GNA11P29992 359 aa22.34■■□□□ 1.17
CCDC40-206ENST00000572083 JAK3P52333 1124 aa22.34■■□□□ 1.17
CCDC40-206ENST00000572083 RCAN1P53805 252 aa22.34■■□□□ 1.17
CCDC40-206ENST00000572083 RHPN2Q8IUC4 686 aa22.34■■□□□ 1.17
CCDC40-206ENST00000572083 RTP3Q9BQQ7 232 aa22.34■■□□□ 1.17
CCDC40-206ENST00000572083 TEKT3Q9BXF9 490 aa22.34■■□□□ 1.17
CCDC40-206ENST00000572083 EMILIN2Q9BXX0 1053 aa22.34■■□□□ 1.17
CCDC40-206ENST00000572083 CACNA1AO00555 2505 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 EDIL3O43854 480 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 CNPP09543 421 aaKnown RBP22.33■■□□□ 1.17
CCDC40-206ENST00000572083 SKIP12755 728 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 SFNP31947 248 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 LETM2Q2VYF4 491 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 CATSPER4Q7RTX7 472 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 KSR1Q8IVT5 923 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 SLC5A5Q92911 643 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 PHKBQ93100 1093 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 NLRP4Q96MN2 994 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 CEP89Q96ST8 783 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 RIT2Q99578 217 aa22.33■■□□□ 1.17
CCDC40-206ENST00000572083 N4BP1O75113 896 aaKnown RBP22.32■■□□□ 1.16
CCDC40-206ENST00000572083 CFHP08603 1231 aa22.32■■□□□ 1.16
CCDC40-206ENST00000572083 CPA1P15085 419 aa22.32■■□□□ 1.16
CCDC40-206ENST00000572083 DNM2P50570 870 aa22.32■■□□□ 1.16
CCDC40-206ENST00000572083 RAB27AP51159 221 aa22.32■■□□□ 1.16
CCDC40-206ENST00000572083 IRX6P78412 446 aaPredicted RBP22.32■■□□□ 1.16
CCDC40-206ENST00000572083 FGD1P98174 961 aa22.32■■□□□ 1.16
CCDC40-206ENST00000572083 CDC42EP1Q00587 391 aa22.32■■□□□ 1.16
CCDC40-206ENST00000572083 MIER3Q7Z3K6 550 aa22.32■■□□□ 1.16
CCDC40-206ENST00000572083 ZNF410Q86VK4 478 aa22.32■■□□□ 1.16
CCDC40-206ENST00000572083 RSAD2Q8WXG1 361 aa22.32■■□□□ 1.16
CCDC40-206ENST00000572083 SUCLA2Q9P2R7 463 aaPredicted RBP22.32■■□□□ 1.16
CCDC40-206ENST00000572083 IGKV6-21A0A0C4DH24 114 aa22.31■■□□□ 1.16
CCDC40-206ENST00000572083 CCDC196A0A1B0GTZ2 297 aa22.31■■□□□ 1.16
CCDC40-206ENST00000572083 STK25O00506 426 aa22.31■■□□□ 1.16
CCDC40-206ENST00000572083 C2CD2LO14523 706 aa22.31■■□□□ 1.16
CCDC40-206ENST00000572083 DDHD2O94830 711 aa22.31■■□□□ 1.16
CCDC40-206ENST00000572083 AFF1P51825 1210 aaKnown RBP22.31■■□□□ 1.16
CCDC40-206ENST00000572083 XKR3Q5GH77 459 aa22.31■■□□□ 1.16
CCDC40-206ENST00000572083 C15orf39Q6ZRI6 1047 aa22.31■■□□□ 1.16
CCDC40-206ENST00000572083 URGCPQ8TCY9 931 aa22.31■■□□□ 1.16
CCDC40-206ENST00000572083 BICD2Q8TD16 824 aa22.31■■□□□ 1.16
CCDC40-206ENST00000572083 NIFKQ9BYG3 293 aaKnown RBP22.31■■□□□ 1.16
CCDC40-206ENST00000572083 INO80BQ9C086 356 aaPredicted RBP22.31■■□□□ 1.16
CCDC40-206ENST00000572083 MAN1C1Q9NR34 630 aa22.31■■□□□ 1.16
CCDC40-206ENST00000572083 PRPF3O43395 683 aaKnown RBP22.3■■□□□ 1.16
CCDC40-206ENST00000572083 ZNF623O75123 536 aa22.3■■□□□ 1.16
CCDC40-206ENST00000572083 STBD1O95210 358 aa22.3■■□□□ 1.16
CCDC40-206ENST00000572083 MYBP10242 640 aa22.3■■□□□ 1.16
CCDC40-206ENST00000572083 GBP2P32456 591 aaPredicted RBP22.3■■□□□ 1.16
CCDC40-206ENST00000572083 AGMOQ6ZNB7 445 aa22.3■■□□□ 1.16
CCDC40-206ENST00000572083 KCNG4Q8TDN1 519 aa22.3■■□□□ 1.16
CCDC40-206ENST00000572083 MRPL17Q9NRX2 175 aaKnown RBP22.3■■□□□ 1.16
CCDC40-206ENST00000572083 VPS54Q9P1Q0 977 aa22.3■■□□□ 1.16
CCDC40-206ENST00000572083 IGSF9Q9P2J2 1179 aa22.3■■□□□ 1.16
CCDC40-206ENST00000572083 PCDHB2Q9Y5E7 798 aa22.3■■□□□ 1.16
CCDC40-206ENST00000572083 KRBA1A5PL33 1030 aa22.29■■□□□ 1.16
CCDC40-206ENST00000572083 LILRB3O75022 631 aa22.29■■□□□ 1.16
CCDC40-206ENST00000572083 PSMD10O75832 226 aa22.29■■□□□ 1.16
CCDC40-206ENST00000572083 RFX1P22670 979 aa22.29■■□□□ 1.16
CCDC40-206ENST00000572083 CCDC148Q8NFR7 591 aa22.29■■□□□ 1.16
CCDC40-206ENST00000572083 PGBD4Q96DM1 585 aa22.29■■□□□ 1.16
CCDC40-206ENST00000572083 RSAD1Q9HA92 442 aa22.29■■□□□ 1.16
CCDC40-206ENST00000572083 AGPAT5Q9NUQ2 364 aa22.29■■□□□ 1.16
CCDC40-206ENST00000572083 CA14Q9ULX7 337 aa22.29■■□□□ 1.16
CCDC40-206ENST00000572083 NID2Q14112 1375 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 EP300Q09472 2414 aaPredicted RBP22.28■■□□□ 1.16
CCDC40-206ENST00000572083 NRP1O14786 923 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 MAFO75444 373 aaPredicted RBP22.28■■□□□ 1.16
CCDC40-206ENST00000572083 POMCP01189 267 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 AK2P54819 239 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 AKAP17AQ02040 695 aaKnown RBP22.28■■□□□ 1.16
CCDC40-206ENST00000572083 KRT32Q14532 448 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 TSGA10IPQ3SY00 556 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 PLA2G4FQ68DD2 849 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 Q6ZUG5 572 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms