RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 H3BQ06 376 aaPredicted RBP19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 FGF18O76093 207 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 ERLIN2O94905 339 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 XRCC6P12956 609 aaKnown RBP eCLIP19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 LAG3P18627 525 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 GLRA2P23416 452 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 RPA1P27694 616 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 GTF2F1P35269 517 aaKnown RBP eCLIP19.76■□□□□ 0.757e-25■□□□□ 11
CTDNEP1-207ENST00000572043 ARL2P36404 184 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 HYAL1Q12794 435 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 LARP1BQ659C4 914 aaKnown RBP19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 HAUS3Q68CZ6 603 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 MICAL1Q8TDZ2 1067 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 CPB2Q96IY4 423 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 UNC80Q8N2C7 3258 aa19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 SKIP12755 728 aa19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 PTENP60484 403 aa19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 IL17AQ16552 155 aa19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 ADGRD2Q7Z7M1 963 aa19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 RBM23Q86U06 439 aaKnown RBP19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 SNX29Q8TEQ0 813 aa19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 DBR1Q9UK59 544 aaKnown RBP19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 KIAA1024Q9UPX6 916 aa19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 PCDHB2Q9Y5E7 798 aa19.75■□□□□ 0.75
CTDNEP1-207ENST00000572043 LRRIQ4A6NIV6 560 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 TSPAN1O60635 241 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 CDC25AP30304 524 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 HOXA11P31270 313 aaPredicted RBP19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 RILPL1Q5EBL4 403 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 UBXN11Q5T124 520 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 PADI6Q6TGC4 694 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 KCNT2Q6UVM3 1135 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 DTHD1Q6ZMT9 781 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 PABPC5Q96DU9 382 aaKnown RBP19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 ZNF558Q96NG5 402 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 TRAIPQ9BWF2 469 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 POLD4Q9HCU8 107 aa19.74■□□□□ 0.75
CTDNEP1-207ENST00000572043 RALGAPA2Q2PPJ7 1873 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 PRUNE2Q8WUY3 3088 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 NT5C1B-RDH14C9J2C7 533 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 LINC01565O15544 149 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 RAB27AP51159 221 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 MBTD1Q05BQ5 628 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 ZRSR1Q15695 479 aaKnown RBP19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 CLUL1Q15846 466 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 GLB1LQ6UWU2 654 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 MCPH1Q8NEM0 835 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 PGBD4Q96DM1 585 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 EIF2AQ9BY44 585 aaKnown RBP19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 RAB34Q9BZG1 259 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 BHMT2Q9H2M3 363 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 TLR9Q9NR96 1032 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 FOXD4L1Q9NU39 408 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 DDX19AQ9NUU7 478 aaKnown RBP19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 NLRC5Q86WI3 1866 aa19.73■□□□□ 0.75
CTDNEP1-207ENST00000572043 TNFRSF10AO00220 468 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 B4GALT5O43286 388 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 OFD1O75665 1012 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 NRIP1P48552 1158 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 ERVFC1P60507 584 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 CSPP1Q1MSJ5 1256 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 LEXMQ3ZCV2 418 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 NOMO2Q5JPE7 1267 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 CDR2LQ86X02 465 aaPredicted RBP19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 IGSF22Q8N9C0 903 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 MRPL9Q9BYD2 267 aaKnown RBP19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 GBP3Q9H0R5 595 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 GTF3C3Q9Y5Q9 886 aa19.72■□□□□ 0.75
CTDNEP1-207ENST00000572043 VPS37CA5D8V6 355 aaPredicted RBP19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 LAD1O00515 517 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 PER2O15055 1255 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 ZNF623O75123 536 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 ZC3H11AO75152 810 aaKnown RBP eCLIP19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 LIG1P18858 919 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 CYP11B2P19099 503 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 BCAR1P56945 870 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 UBE3AQ05086 875 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 RNASELQ05823 741 aaKnown RBP19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 DLX2Q07687 328 aaPredicted RBP19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 NCBP1Q09161 790 aaKnown RBP19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 CUL4AQ13619 759 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 PDIA5Q14554 519 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 PLPP4Q5VZY2 271 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 KRT79Q5XKE5 535 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 PTCRAQ6ISU1 281 aaPredicted RBP19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 NOTUMQ6P988 496 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 AGMOQ6ZNB7 445 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 IFNLR1Q8IU57 520 aaPredicted RBP19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 BSNDQ8WZ55 320 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 MRPS27Q92552 414 aaKnown RBP19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 PPP2R3CQ969Q6 453 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 APOL6Q9BWW8 343 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 RSAD1Q9HA92 442 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 TBC1D13Q9NVG8 400 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 SPG21Q9NZD8 308 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 HES2Q9Y543 173 aa19.71■□□□□ 0.75
CTDNEP1-207ENST00000572043 VWA3AA6NCI4 1184 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms