RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 TOPORSQ9NS56 1045 aaPredicted RBP3.83□□□□□ -1.8
RPA1-204ENST00000571725 DNAJC28Q9NX36 388 aa3.83□□□□□ -1.8
RPA1-204ENST00000571725 DTLQ9NZJ0 730 aa3.83□□□□□ -1.8
RPA1-204ENST00000571725 HSPBP1Q9NZL4 362 aa3.83□□□□□ -1.8
RPA1-204ENST00000571725 IP6K2Q9UHH9 426 aa3.83□□□□□ -1.8
RPA1-204ENST00000571725 SAP30BPQ9UHR5 308 aaKnown RBP3.83□□□□□ -1.8
RPA1-204ENST00000571725 RCAN3Q9UKA8 241 aa3.83□□□□□ -1.8
RPA1-204ENST00000571725 AQRO60306 1485 aaKnown RBP eCLIP3.83□□□□□ -1.8
RPA1-204ENST00000571725 MAGI1Q96QZ7 1491 aaPredicted RBP3.83□□□□□ -1.8
RPA1-204ENST00000571725 EEA1Q15075 1411 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 TDRD9Q8NDG6 1382 aaKnown RBP3.82□□□□□ -1.8
RPA1-204ENST00000571725 TNKSO95271 1327 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 A0A087X1B8 175 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 NPEPPSL1A6NEC2 478 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 FAM90A27PA6NNH2 459 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 GOLGA6L22H0YM25 854 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 DVL2O14641 736 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 APOL3O95236 402 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 IL33O95760 270 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 MT-CO1P00395 513 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 XPAP23025 273 aaPredicted RBP3.82□□□□□ -1.8
RPA1-204ENST00000571725 PTGS1P23219 599 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 IARSP41252 1262 aaKnown RBP3.82□□□□□ -1.8
RPA1-204ENST00000571725 SELENOPP49908 381 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 SLC16A1P53985 500 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 GRIN1Q05586 938 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 DPTQ07507 201 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 HDAC1Q13547 482 aaPredicted RBP3.82□□□□□ -1.8
RPA1-204ENST00000571725 UGT8Q16880 541 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 INAVAQ3KP66 663 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 CATSPEREQ5SY80 951 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 VASNQ6EMK4 673 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 SLFN12LQ6IEE8 588 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 CXorf67Q86X51 503 aaPredicted RBP3.82□□□□□ -1.8
RPA1-204ENST00000571725 MIB1Q86YT6 1006 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 TCEAL8Q8IYN2 117 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 MIER2Q8N344 545 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 ARRDC4Q8NCT1 418 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 IGDCC4Q8TDY8 1250 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 LMBR1Q8WVP7 490 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 ASB15Q8WXK1 588 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 RTF1Q92541 710 aaKnown RBP3.82□□□□□ -1.8
RPA1-204ENST00000571725 ERCC4Q92889 916 aaPredicted RBP3.82□□□□□ -1.8
RPA1-204ENST00000571725 VOPP1Q96AW1 172 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 HSPBAP1Q96EW2 488 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 TMEM209Q96SK2 561 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 SSBP3Q9BWW4 388 aaPredicted RBP3.82□□□□□ -1.8
RPA1-204ENST00000571725 PRDM11Q9NQV5 511 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 FBLN5Q9UBX5 448 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 SIT1Q9Y3P8 196 aa3.82□□□□□ -1.8
RPA1-204ENST00000571725 CUL7Q14999 1698 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 ADAMTS12P58397 1594 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 SNAPC4Q5SXM2 1469 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 PRAMEF22A3QJZ6 481 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 KRTAP29-1A8MX34 341 aaPredicted RBP3.81□□□□□ -1.8
RPA1-204ENST00000571725 ERC2O15083 957 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 NRP2O60462 931 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 DTNBO60941 627 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 ABLIM3O94929 683 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 LTFP02788 710 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 MMEP08473 750 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 CYP2C8P10632 490 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 APEX1P27695 318 aaKnown RBP3.81□□□□□ -1.8
RPA1-204ENST00000571725 AOAHP28039 575 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 MRPS9P82933 396 aaKnown RBP3.81□□□□□ -1.8
RPA1-204ENST00000571725 ADCY2Q08462 1091 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 NFATC3Q12968 1075 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 SPIDRQ14159 915 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 SEC23AQ15436 765 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 SURF1Q15526 300 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 CCDC178Q5BJE1 867 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 PRAMEF18Q5VWM3 479 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 PRAMEF9Q5VWM5 478 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 KIAA1841Q6NSI8 718 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 ESRP1Q6NXG1 681 aaKnown RBP3.81□□□□□ -1.8
RPA1-204ENST00000571725 CIR1Q86X95 450 aaPredicted RBP3.81□□□□□ -1.8
RPA1-204ENST00000571725 RBM12BQ8IXT5 1001 aaKnown RBP3.81□□□□□ -1.8
RPA1-204ENST00000571725 CCDC146Q8IYE0 955 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 CBARPQ8N350 705 aaPredicted RBP3.81□□□□□ -1.8
RPA1-204ENST00000571725 CPA6Q8N4T0 437 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 AUTS2Q8WXX7 1259 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 ZNF496Q96IT1 587 aaPredicted RBP3.81□□□□□ -1.8
RPA1-204ENST00000571725 ORAI2Q96SN7 254 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 SEMA4AQ9H3S1 761 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 POFUT1Q9H488 388 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 INCENPQ9NQS7 918 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 GPR45Q9Y5Y3 372 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 NUMBLQ9Y6R0 609 aa3.81□□□□□ -1.8
RPA1-204ENST00000571725 SYNJ2O15056 1496 aa3.8□□□□□ -1.8
RPA1-204ENST00000571725 FHAD1B1AJZ9 1412 aa3.8□□□□□ -1.8
RPA1-204ENST00000571725 MROH6A6NGR9 719 aa3.8□□□□□ -1.8
RPA1-204ENST00000571725 ACOT7O00154 380 aa3.8□□□□□ -1.8
RPA1-204ENST00000571725 LAMTOR5O43504 91 aa3.8□□□□□ -1.8
RPA1-204ENST00000571725 ZNF202O95125 648 aa3.8□□□□□ -1.8
RPA1-204ENST00000571725 RPLP2P05387 115 aaKnown RBP3.8□□□□□ -1.8
RPA1-204ENST00000571725 PF4V1P10720 104 aa3.8□□□□□ -1.8
RPA1-204ENST00000571725 HSPA6P17066 643 aa3.8□□□□□ -1.8
RPA1-204ENST00000571725 AKAP5P24588 427 aa3.8□□□□□ -1.8
RPA1-204ENST00000571725 MCM7P33993 719 aa3.8□□□□□ -1.8
RPA1-204ENST00000571725 MC3RP41968 323 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms