RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 AKT3Q9Y243 479 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 NFE2L3Q9Y4A8 694 aa13.11□□□□□ -0.31
CDRT1-206ENST00000571263 A0A0U1RQG5 324 aaPredicted RBP13.1□□□□□ -0.31
CDRT1-206ENST00000571263 DENND3A2RUS2 1198 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 CETN3O15182 167 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 SLC16A4O15374 487 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 IRX5P78411 483 aaPredicted RBP13.1□□□□□ -0.31
CDRT1-206ENST00000571263 NCBP1Q09161 790 aaKnown RBP13.1□□□□□ -0.31
CDRT1-206ENST00000571263 CAPSQ13938 189 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 NCAPHQ15003 741 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 MAPK6Q16659 721 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 CDCA2Q69YH5 1023 aaPredicted RBP13.1□□□□□ -0.31
CDRT1-206ENST00000571263 ANKRD40Q6AI12 368 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 SLFN12LQ6IEE8 588 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 TTI2Q6NXR4 508 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 SRGAP1Q7Z6B7 1085 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 RPAINQ86UA6 219 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 LUZP1Q86V48 1076 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 SLC9A9Q8IVB4 645 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 MAP4K3Q8IVH8 894 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 C12orf56Q8IXR9 622 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 KIAA0319LQ8IZA0 1049 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 LRRC71Q8N4P6 559 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 CSGALNACT2Q8N6G5 542 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 RNF149Q8NC42 400 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 ASAP3Q8TDY4 903 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 PRIMPOLQ96LW4 560 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 CTAGE1Q96RT6 745 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 KCTD10Q9H3F6 313 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 SEMA6BQ9H3T3 888 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 POLD4Q9HCU8 107 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 STARD7Q9NQZ5 370 aa13.1□□□□□ -0.31
CDRT1-206ENST00000571263 MAGEC2Q9UBF1 373 aaPredicted RBP13.1□□□□□ -0.31
CDRT1-206ENST00000571263 M0QZ92 97 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 CAND2O75155 1236 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 TPM3P06753 285 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 TPM2P07951 284 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 SRGAP2CP0DJJ0 459 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 EEF1GP26641 437 aaKnown RBP13.09□□□□□ -0.31
CDRT1-206ENST00000571263 CLCN3P51790 818 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 CASP5P51878 434 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 STX17P56962 302 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 PTENP60484 403 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 ADAM9Q13443 819 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 MTFR1Q15390 333 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 FAM187BQ17R55 369 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 ZCWPW2Q504Y3 356 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 ZC2HC1CQ53FD0 456 aaPredicted RBP13.09□□□□□ -0.31
CDRT1-206ENST00000571263 FAM47CQ5HY64 1035 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 ZPBP2Q6X784 338 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 FILIP1Q7Z7B0 1213 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 NELFCDQ8IXH7 590 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 SLC43A3Q8NBI5 491 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 BSNDQ8WZ55 320 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 SRRTQ9BXP5 876 aaKnown RBP13.09□□□□□ -0.31
CDRT1-206ENST00000571263 GCOM2Q9BZD3 368 aaPredicted RBP13.09□□□□□ -0.31
CDRT1-206ENST00000571263 PRMT7Q9NVM4 692 aaPredicted RBP13.09□□□□□ -0.31
CDRT1-206ENST00000571263 FANCLQ9NW38 375 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 MROH7Q68CQ1 1323 aa13.09□□□□□ -0.31
CDRT1-206ENST00000571263 A0A1W2PQ45 241 aaPredicted RBP13.08□□□□□ -0.32
CDRT1-206ENST00000571263 A0A1W2PQY0 241 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 ARVCFO00192 962 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 TREHO43280 583 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 LDHAP00338 332 aaKnown RBP13.08□□□□□ -0.32
CDRT1-206ENST00000571263 PIGRP01833 764 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 TFRCP02786 760 aaKnown RBP13.08□□□□□ -0.32
CDRT1-206ENST00000571263 GARTP22102 1010 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 GPC3P51654 580 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 SOX10P56693 466 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 PTK7Q13308 1070 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 DRP2Q13474 957 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 PTGISQ16647 500 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 SARM1Q6SZW1 724 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 APBB1IPQ7Z5R6 666 aaPredicted RBP13.08□□□□□ -0.32
CDRT1-206ENST00000571263 SERINC5Q86VE9 423 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 GLIS3Q8NEA6 775 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 U2AF1L4Q8WU68 220 aaKnown RBP13.08□□□□□ -0.32
CDRT1-206ENST00000571263 NLRP7Q8WX94 980 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 NLRP4Q96MN2 994 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 DUSP9Q99956 384 aaKnown RBP13.08□□□□□ -0.32
CDRT1-206ENST00000571263 MKNK1Q9BUB5 465 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 MRPL4Q9BYD3 311 aaKnown RBP13.08□□□□□ -0.32
CDRT1-206ENST00000571263 FZD8Q9H461 694 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 METTL14Q9HCE5 456 aaKnown RBP13.08□□□□□ -0.32
CDRT1-206ENST00000571263 KIAA1586Q9HCI6 787 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 NOD1Q9Y239 953 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 MYH11P35749 1972 aa13.08□□□□□ -0.32
CDRT1-206ENST00000571263 LRRC10BA6NIK2 292 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 ACKR2O00590 384 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 MAPK13O15264 365 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
CDRT1-206ENST00000571263 TGFB1I1O43294 461 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 CBFA2T2O43439 604 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 HOXD13P35453 343 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 GJA8P48165 433 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 LIG4P49917 911 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 CRYBB1P53674 252 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms