RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MYCLP12524 364 aaPredicted RBP8.03□□□□□ -1.12
CHD3-213ENST00000571249 SIM1P81133 766 aaPredicted RBP8.03□□□□□ -1.12
CHD3-213ENST00000571249 PPP2R5DQ14738 602 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 UAP1L1Q3KQV9 507 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 COLEC12Q5KU26 742 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 PPP4R3BQ5MIZ7 849 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 GIMAP6Q6P9H5 292 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 KCNV1Q6PIU1 500 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 SPATA31D4Q6ZUB0 917 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 SLC24A5Q71RS6 500 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 CMASQ8NFW8 434 aaPredicted RBP8.03□□□□□ -1.12
CHD3-213ENST00000571249 BCL7CQ8WUZ0 217 aaPredicted RBP8.03□□□□□ -1.12
CHD3-213ENST00000571249 SMG7Q92540 1137 aaKnown RBP8.03□□□□□ -1.12
CHD3-213ENST00000571249 GLMNQ92990 594 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 LOXL4Q96JB6 756 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 KXD1Q9BQD3 176 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 VN1R3Q9BXE9 311 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 VPS45Q9NRW7 570 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 RGS18Q9NS28 235 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 PAG1Q9NWQ8 432 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 CCDC171Q6TFL3 1326 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 IGSF9BQ9UPX0 1349 aa8.03□□□□□ -1.12
CHD3-213ENST00000571249 LNP1A1A4G5 178 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 DENND3A2RUS2 1198 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 NOP56O00567 594 aaKnown RBP8.02□□□□□ -1.13
CHD3-213ENST00000571249 SSBP05455 408 aaKnown RBP eCLIP8.02□□□□□ -1.13
CHD3-213ENST00000571249 TDO2P48775 406 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 FAM193AP78312 1265 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 FAM189BP81408 668 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 BMS1Q14692 1282 aaKnown RBP8.02□□□□□ -1.13
CHD3-213ENST00000571249 PPFIBP1Q86W92 1011 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 TMEM117Q9H0C3 514 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 BOLA2Q9H3K6 86 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 CDHR5Q9HBB8 845 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 IL1RAPL2Q9NP60 686 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 PXMP2Q9NR77 195 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 IL17RBQ9NRM6 502 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 ZNF215Q9UL58 517 aaPredicted RBP8.02□□□□□ -1.13
CHD3-213ENST00000571249 SQORQ9Y6N5 450 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 ZFHX3Q15911 3703 aa8.02□□□□□ -1.13
CHD3-213ENST00000571249 UTP20O75691 2785 aaKnown RBP8.02□□□□□ -1.13
CHD3-213ENST00000571249 MBLAC1A4D2B0 266 aaPredicted RBP8.01□□□□□ -1.13
CHD3-213ENST00000571249 LILRB3O75022 631 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 WISP1O95388 367 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 APPP05067 770 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 ABL2P42684 1182 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 PXNP49023 591 aaPredicted RBP8.01□□□□□ -1.13
CHD3-213ENST00000571249 BCAR1P56945 870 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 IGBP1P78318 339 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 PFKPQ01813 784 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 CFHR1Q03591 330 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 PPFIA1Q13136 1202 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 GRIK4Q16099 956 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 IER5Q5VY09 327 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 PCSK4Q6UW60 755 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 CACNA2D4Q7Z3S7 1137 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 LRRC43Q8N309 656 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 TMEM40Q8WWA1 233 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 TMEM169Q96HH4 297 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 CELF4Q9BZC1 486 aaKnown RBP8.01□□□□□ -1.13
CHD3-213ENST00000571249 PLA2G2FQ9BZM2 168 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 BCL11AQ9H165 835 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 ADAMTS10Q9H324 1103 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 EPB41L4AQ9HCS5 686 aaPredicted RBP8.01□□□□□ -1.13
CHD3-213ENST00000571249 TMEM161AQ9NX61 479 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 TUBE1Q9UJT0 475 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 MRPS17Q9Y2R5 130 aaKnown RBP8.01□□□□□ -1.13
CHD3-213ENST00000571249 NOC2LQ9Y3T9 749 aaKnown RBP8.01□□□□□ -1.13
CHD3-213ENST00000571249 TRPV2Q9Y5S1 764 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 KAT6AQ92794 2004 aa8.01□□□□□ -1.13
CHD3-213ENST00000571249 TSPY2A6NKD2 308 aa8□□□□□ -1.13
CHD3-213ENST00000571249 NEFLP07196 543 aa8□□□□□ -1.13
CHD3-213ENST00000571249 TGFB3P10600 412 aa8□□□□□ -1.13
CHD3-213ENST00000571249 HSPD1P10809 573 aaKnown RBP8□□□□□ -1.13
CHD3-213ENST00000571249 CCR10P46092 362 aa8□□□□□ -1.13
CHD3-213ENST00000571249 ALDH7A1P49419 539 aaKnown RBP8□□□□□ -1.13
CHD3-213ENST00000571249 NTHL1P78549 312 aa8□□□□□ -1.13
CHD3-213ENST00000571249 SP4Q02446 784 aa8□□□□□ -1.13
CHD3-213ENST00000571249 CLLU1OSQ5K130 101 aa8□□□□□ -1.13
CHD3-213ENST00000571249 CYFIP1Q7L576 1253 aa8□□□□□ -1.13
CHD3-213ENST00000571249 RAB44Q7Z6P3 723 aaPredicted RBP8□□□□□ -1.13
CHD3-213ENST00000571249 DDX53Q86TM3 631 aaKnown RBP8□□□□□ -1.13
CHD3-213ENST00000571249 MCF2L2Q86YR7 1114 aa8□□□□□ -1.13
CHD3-213ENST00000571249 FAM181AQ8N9Y4 354 aa8□□□□□ -1.13
CHD3-213ENST00000571249 IL31RAQ8NI17 732 aa8□□□□□ -1.13
CHD3-213ENST00000571249 PIP4K2CQ8TBX8 421 aa8□□□□□ -1.13
CHD3-213ENST00000571249 SPIRE2Q8WWL2 714 aa8□□□□□ -1.13
CHD3-213ENST00000571249 MAF1Q9H063 256 aa8□□□□□ -1.13
CHD3-213ENST00000571249 NT5C3AQ9H0P0 336 aa8□□□□□ -1.13
CHD3-213ENST00000571249 PIDD1Q9HB75 910 aa8□□□□□ -1.13
CHD3-213ENST00000571249 TMEM9BQ9NQ34 198 aa8□□□□□ -1.13
CHD3-213ENST00000571249 C1orf112Q9NSG2 853 aa8□□□□□ -1.13
CHD3-213ENST00000571249 RBM12Q9NTZ6 932 aaKnown RBP8□□□□□ -1.13
CHD3-213ENST00000571249 ST3GAL5Q9UNP4 418 aa8□□□□□ -1.13
CHD3-213ENST00000571249 GINS2Q9Y248 185 aa8□□□□□ -1.13
CHD3-213ENST00000571249 EXOC6BQ9Y2D4 811 aa8□□□□□ -1.13
CHD3-213ENST00000571249 FBN3Q75N90 2809 aa8□□□□□ -1.13
CHD3-213ENST00000571249 USP9YO00507 2555 aaPredicted RBP8□□□□□ -1.13
CHD3-213ENST00000571249 PLXNB3Q9ULL4 1909 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 C2orf72A6NCS6 295 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms