RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 HVCN1Q96D96 273 aa18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 AMNQ9BXJ7 453 aa18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 INTS2Q9H0H0 1204 aaKnown RBP18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 TLDC2A0PJX2 215 aa18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 VCAM1P19320 739 aa18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 ARHGAP44Q17R89 818 aa18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 SGSM3Q96HU1 749 aa18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 CCDC17Q96LX7 622 aa18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 ZNF317Q96PQ6 595 aaPredicted RBP18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 ADAM7Q9H2U9 754 aa18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 STK24Q9Y6E0 443 aa18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 QSER1Q2KHR3 1735 aa18.26■□□□□ 0.51
PCDHB19P-201ENST00000570871 SMIM23A6NLE4 172 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 ZBTB39O15060 712 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 MMEP08473 750 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 KRT13P13646 458 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 HOXA13P31271 388 aaPredicted RBP18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 CYP2J2P51589 502 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 MAPK7Q13164 816 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 DHX34Q14147 1143 aaKnown RBP18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 LTBP1Q14766 1721 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 SNCBQ16143 134 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 UBAP2Q5T6F2 1119 aaKnown RBP18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 DENND2CQ68D51 928 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 FAM228AQ86W67 206 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 MKL1Q969V6 931 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 C18orf8Q96DM3 657 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 SELENOSQ9BQE4 189 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 CXorf56Q9H5V9 222 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 SIPA1L1O43166 1804 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 ANKRD62A6NC57 917 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 MMP13P45452 471 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 ATXN2LQ8WWM7 1075 aaKnown RBP18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 P3H4Q92791 437 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 PGM2Q96G03 612 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 MKNK1Q9BUB5 465 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 KDM4CQ9H3R0 1056 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 AZI2Q9H6S1 392 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 APEX2Q9UBZ4 518 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 SUGT1Q9Y2Z0 365 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 ALG6Q9Y672 507 aa18.25■□□□□ 0.51
PCDHB19P-201ENST00000570871 FOSP01100 380 aaPredicted RBP18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 CIITAP33076 1130 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 PTGIRP43119 386 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 XRCC4Q13426 336 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 SLC29A2Q14542 456 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 NFIL3Q16649 462 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 PREPLQ4J6C6 727 aaPredicted RBP18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 C1orf186Q6ZWK4 172 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 FBXO11Q86XK2 927 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 CCDC197Q8NCU1 140 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 GRHL1Q9NZI5 618 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 ZNF219Q9P2Y4 722 aaPredicted RBP18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 RPTORQ8N122 1335 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 LRRN2O75325 713 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 DRG2P55039 364 aaKnown RBP18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 IFI35P80217 286 aaPredicted RBP18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 APOBEC3HQ6NTF7 200 aaKnown RBP18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 SIAH1Q8IUQ4 282 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 TPH2Q8IWU9 490 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 KRT35Q92764 455 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 ZNF622Q969S3 477 aaKnown RBP eCLIP18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 CRAMP1Q96RY5 1269 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 NYAP2Q9P242 653 aa18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 TPX2Q9ULW0 747 aaKnown RBP18.24■□□□□ 0.51
PCDHB19P-201ENST00000570871 CCT8L1PA6NM43 557 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 CCDC169A6NNP5 214 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 FOXN3O00409 490 aaPredicted RBP18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 OPLAHO14841 1288 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 CCDC172P0C7W6 258 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 GHRP10912 638 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 ZNF76P36508 570 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 RPL21P46778 160 aaKnown RBP18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 MARCKSL1P49006 195 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 SF3A3Q12874 501 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 PHLDB3Q6NSJ2 640 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 SLC20A1Q8WUM9 679 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 FIZ1Q96SL8 496 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 HSD17B14Q9BPX1 270 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 COA1Q9GZY4 146 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 SEMA4AQ9H3S1 761 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 PARVGQ9HBI0 331 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 RASAL2Q9UJF2 1139 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 SLX4Q8IY92 1834 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 RGS16O15492 202 aaPredicted RBP18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 PHF2O75151 1096 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 MYL7Q01449 175 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 KIF22Q14807 665 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 PRELID2Q8N945 189 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 UHMK1Q8TAS1 419 aaKnown RBP18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 AGPAT3Q9NRZ7 376 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 DMAC2Q9NW81 257 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 FRMD4BQ9Y2L6 1034 aa18.23■□□□□ 0.51
PCDHB19P-201ENST00000570871 PPIP5K2O43314 1243 aa18.22■□□□□ 0.51
PCDHB19P-201ENST00000570871 CHMP2AO43633 222 aa18.22■□□□□ 0.51
PCDHB19P-201ENST00000570871 DNAJC8O75937 253 aaPredicted RBP18.22■□□□□ 0.51
PCDHB19P-201ENST00000570871 SLITRK3O94933 977 aa18.22■□□□□ 0.51
PCDHB19P-201ENST00000570871 CACNB3P54284 484 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms