RNA–Protein interactions for RNA: ENST00000570276.5

ULK3-222, Transcript of unc-51 like kinase 3, human

TSL 1 (best)

Gene ULK3, Length 2,951 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ULK3-222	ENST00000570276	NKX1-2	Q9UD57	310 aa	Predicted RBP	18.43	■□□□□ 0.54
ULK3-222	ENST00000570276	POLL	Q9UGP5	575 aa		18.43	■□□□□ 0.54
ULK3-222	ENST00000570276	AMFR	Q9UKV5	643 aa		18.43	■□□□□ 0.54
ULK3-222	ENST00000570276	TTLL1	O95922	423 aa		18.43	■□□□□ 0.54
ULK3-222	ENST00000570276	IK	Q13123	557 aa	Predicted RBP	18.43	■□□□□ 0.54
ULK3-222	ENST00000570276	MEX3C	Q5U5Q3	659 aa	Known RBP	18.43	■□□□□ 0.54
ULK3-222	ENST00000570276	CHMP6	Q96FZ7	201 aa		18.43	■□□□□ 0.54
ULK3-222	ENST00000570276	FMO2	Q99518	471 aa		18.43	■□□□□ 0.54
ULK3-222	ENST00000570276	SPATA31C1	P0DKV0	1188 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	CHN1	P15882	459 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	EMC10	Q5UCC4	262 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	LRIG3	Q6UXM1	1119 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	FBXO25	Q8TCJ0	367 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	ALG3	Q92685	438 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	C18orf8	Q96DM3	657 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	THAP2	Q9H0W7	228 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	DNM3	Q9UQ16	869 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	ABCA3	Q99758	1704 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276		A6NHS1	94 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	FAM86B1	E9PN63	330 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	RNF8	O76064	485 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	FAM163B	P0C2L3	166 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	FAM86B2	P0C5J1	330 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	NFIA	Q12857	509 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	MIGA2	Q7L4E1	593 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	MGARP	Q8TDB4	240 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	ATP8B4	Q8TF62	1192 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	PSMD1	Q99460	953 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	AZI2	Q9H6S1	392 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	ACP6	Q9NPH0	428 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	STXBP5L	Q9Y2K9	1186 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	PTPN22	Q9Y2R2	807 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276		H0Y3Z8	333 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	MARS	P56192	900 aa	Known RBP	18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	DRAP1	Q14919	205 aa	Predicted RBP	18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	CCDC25	Q86WR0	208 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	CNBD1	Q8NA66	436 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	KLHL23	Q8NBE8	558 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	PHC3	Q8NDX5	983 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	ECT2	Q9H8V3	914 aa		18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	DBR1	Q9UK59	544 aa	Known RBP	18.42	■□□□□ 0.54
ULK3-222	ENST00000570276	ASTN1	O14525	1302 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	LAMB1	P07942	1786 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	AHCYL1	O43865	530 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	RPS6KA4	O75676	772 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	NQO1	P15559	274 aa	Known RBP	18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	FGFR4	P22455	802 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	SLC29A2	Q14542	456 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	LRRC14	Q15048	493 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	ANO7	Q6IWH7	933 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	RPGR	Q92834	1020 aa	Known RBP	18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	RNF25	Q96BH1	459 aa	Predicted RBP	18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	SEMA4A	Q9H3S1	761 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	DNAJC17	Q9NVM6	304 aa	Known RBP	18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	DNAJC12	Q9UKB3	198 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	COG5	Q9UP83	839 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	EML1	O00423	815 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	PCK1	P35558	622 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	DR1	Q01658	176 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	ADCY1	Q08828	1119 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	CBWD6	Q4V339	395 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	CBWD3	Q5JTY5	395 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	CBWD5	Q5RIA9	395 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	HHAT	Q5VTY9	493 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	OTUD6A	Q7L8S5	288 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	KRT35	Q92764	455 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	NAF1	Q96HR8	494 aa	Known RBP	18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	XPO6	Q96QU8	1125 aa	Known RBP	18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	RPS6KC1	Q96S38	1066 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	USP40	Q9NVE5	1235 aa		18.41	■□□□□ 0.54
ULK3-222	ENST00000570276	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	C5orf60	A6NFR6	353 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	ATMIN	O43313	823 aa	Predicted RBP	18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	MME	P08473	750 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	RFC5	P40937	340 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	STAT1	P42224	750 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	KCNJ1	P48048	391 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	IFI16	Q16666	785 aa	Known RBP	18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	DOK7	Q18PE1	504 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	EDRF1	Q3B7T1	1238 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	UBE2O	Q9C0C9	1292 aa	Known RBP	18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	SERPINB13	Q9UIV8	391 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	GGA1	Q9UJY5	639 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	CCNL1	Q9UK58	526 aa	Predicted RBP	18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	SLC12A4	Q9UP95	1085 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	MYH4	Q9Y623	1939 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	KDM3A	Q9Y4C1	1321 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	NCALD	P61601	193 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	ARHGAP4	P98171	946 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	NUGGC	Q68CJ6	796 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	FRMD5	Q7Z6J6	570 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	TPH2	Q8IWU9	490 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	MYCT1	Q8N699	235 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	SLC20A1	Q8WUM9	679 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	BTBD6	Q96KE9	485 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	POP1	Q99575	1024 aa	Known RBP	18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	PRMT1	Q99873	361 aa	Known RBP	18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	PCMTD2	Q9NV79	361 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	ADAM22	Q9P0K1	906 aa		18.4	■□□□□ 0.54
ULK3-222	ENST00000570276	TCRBV7S2A1N4T	A0A589	114 aa		18.39	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms