RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 DDX53Q86TM3 631 aaKnown RBP23.63■■□□□ 1.37
PKD1-240ENST00000570253 SLC7A3Q8WY07 619 aa23.63■■□□□ 1.37
PKD1-240ENST00000570253 SLKQ9H2G2 1235 aaPredicted RBP23.63■■□□□ 1.37
PKD1-240ENST00000570253 DDX25Q9UHL0 483 aaKnown RBP23.63■■□□□ 1.37
PKD1-240ENST00000570253 IRAK3Q9Y616 596 aa23.63■■□□□ 1.37
PKD1-240ENST00000570253 CYP3A7-CYP3A51PA0A087WV96 503 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 IGKV6-21A0A0C4DH24 114 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 C2CD4DB7Z1M9 353 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 TDP2O95551 362 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 CTSAP10619 480 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 CYP3A7P24462 503 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 DRP2Q13474 957 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 KIAA1841Q6NSI8 718 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 KRT25Q7Z3Z0 450 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 CABP7Q86V35 215 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 GJA10Q969M2 543 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 IGSF21Q96ID5 467 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 FAM193BQ96PV7 902 aaPredicted RBP23.62■■□□□ 1.37
PKD1-240ENST00000570253 PHOX2BQ99453 314 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 EMILIN2Q9BXX0 1053 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 GBP3Q9H0R5 595 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 MFSD1Q9H3U5 465 aa23.62■■□□□ 1.37
PKD1-240ENST00000570253 MARCH6O60337 910 aa23.61■■□□□ 1.37
PKD1-240ENST00000570253 EVCP57679 992 aa23.61■■□□□ 1.37
PKD1-240ENST00000570253 LONRF3Q496Y0 759 aa23.61■■□□□ 1.37
PKD1-240ENST00000570253 RUFY3Q7L099 469 aa23.61■■□□□ 1.37
PKD1-240ENST00000570253 LPPQ93052 612 aa23.61■■□□□ 1.37
PKD1-240ENST00000570253 ACSF2Q96CM8 615 aaPredicted RBP23.61■■□□□ 1.37
PKD1-240ENST00000570253 TBC1D13Q9NVG8 400 aa23.61■■□□□ 1.37
PKD1-240ENST00000570253 PPME1Q9Y570 386 aa23.61■■□□□ 1.37
PKD1-240ENST00000570253 CYP46A1Q9Y6A2 500 aa23.61■■□□□ 1.37
PKD1-240ENST00000570253 ZNF623O75123 536 aa23.6■■□□□ 1.37
PKD1-240ENST00000570253 XBP1P17861 261 aa23.6■■□□□ 1.37
PKD1-240ENST00000570253 ELMSAN1Q6PJG2 1045 aa23.6■■□□□ 1.37
PKD1-240ENST00000570253 ZDHHC14Q8IZN3 488 aa23.6■■□□□ 1.37
PKD1-240ENST00000570253 DAGLBQ8NCG7 672 aa23.6■■□□□ 1.37
PKD1-240ENST00000570253 SH2D3AQ9BRG2 576 aa23.6■■□□□ 1.37
PKD1-240ENST00000570253 NRDE2Q9H7Z3 1164 aa23.6■■□□□ 1.37
PKD1-240ENST00000570253 KANSL3Q9P2N6 904 aa23.6■■□□□ 1.37
PKD1-240ENST00000570253 USTQ9Y2C2 406 aa23.6■■□□□ 1.37
PKD1-240ENST00000570253 CCDC194A0A1B0GVG4 234 aa23.59■■□□□ 1.37
PKD1-240ENST00000570253 TMEM150BA6NC51 233 aa23.59■■□□□ 1.37
PKD1-240ENST00000570253 GFRA3O60609 400 aa23.59■■□□□ 1.37
PKD1-240ENST00000570253 GALTP07902 379 aa23.59■■□□□ 1.37
PKD1-240ENST00000570253 QARSP47897 775 aaKnown RBP23.59■■□□□ 1.37
PKD1-240ENST00000570253 ETNPPLQ8TBG4 499 aa23.59■■□□□ 1.37
PKD1-240ENST00000570253 AUTS2Q8WXX7 1259 aa23.59■■□□□ 1.37
PKD1-240ENST00000570253 ZNF274Q96GC6 653 aaPredicted RBP23.59■■□□□ 1.37
PKD1-240ENST00000570253 NAP1L4Q99733 375 aaKnown RBP23.59■■□□□ 1.37
PKD1-240ENST00000570253 SFXN1Q9H9B4 322 aa23.59■■□□□ 1.37
PKD1-240ENST00000570253 CYP26B1Q9NR63 512 aa23.59■■□□□ 1.37
PKD1-240ENST00000570253 COL4A3BPQ9Y5P4 624 aa23.59■■□□□ 1.37
PKD1-240ENST00000570253 CNTNAP2Q9UHC6 1331 aa23.59■■□□□ 1.37
PKD1-240ENST00000570253 EDIL3O43854 480 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 CDKL5O76039 1030 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 LETM2Q2VYF4 491 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 B3GNT9Q6UX72 402 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 SRGAP1Q7Z6B7 1085 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 PSPC1Q8WXF1 523 aaKnown RBP23.58■■□□□ 1.37
PKD1-240ENST00000570253 CEP170P1Q96L14 293 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 FAM20AQ96MK3 541 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 AGPAT5Q9NUQ2 364 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 FAM86C1Q9NVL1 165 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 CDH22Q9UJ99 828 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 PCDHB2Q9Y5E7 798 aa23.58■■□□□ 1.37
PKD1-240ENST00000570253 EPB41L2O43491 1005 aaKnown RBP23.57■■□□□ 1.36
PKD1-240ENST00000570253 GALR2O43603 387 aaPredicted RBP23.57■■□□□ 1.36
PKD1-240ENST00000570253 GAS2O43903 313 aaKnown RBP23.57■■□□□ 1.36
PKD1-240ENST00000570253 OFD1O75665 1012 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 BRD1O95696 1058 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 ALDH2P05091 517 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 WEE2P0C1S8 567 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 GCFC2P16383 781 aaKnown RBP23.57■■□□□ 1.36
PKD1-240ENST00000570253 EPCAMP16422 314 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 KLRC2P26717 231 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 RFC5P40937 340 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 NCBP1Q09161 790 aaKnown RBP23.57■■□□□ 1.36
PKD1-240ENST00000570253 INF2Q27J81 1249 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 PLA2G4FQ68DD2 849 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 CCDC149Q6ZUS6 474 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 ANO5Q75V66 913 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 OTUD6AQ7L8S5 288 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 OTOP3Q7RTS5 596 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 C12orf76Q8N812 135 aaPredicted RBP23.57■■□□□ 1.36
PKD1-240ENST00000570253 TCP11Q8WWU5 503 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 MBOAT7Q96N66 472 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 CEP89Q96ST8 783 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 TMEM175Q9BSA9 504 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 RSAD1Q9HA92 442 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 UBN1Q9NPG3 1134 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 DPP7Q9UHL4 492 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 SSX2IPQ9Y2D8 614 aa23.57■■□□□ 1.36
PKD1-240ENST00000570253 H0Y858 1186 aa23.56■■□□□ 1.36
PKD1-240ENST00000570253 STBD1O95210 358 aa23.56■■□□□ 1.36
PKD1-240ENST00000570253 PDGFBP01127 241 aaPredicted RBP23.56■■□□□ 1.36
PKD1-240ENST00000570253 P4HBP07237 508 aaKnown RBP23.56■■□□□ 1.36
PKD1-240ENST00000570253 SLC11A1P49279 550 aa23.56■■□□□ 1.36
PKD1-240ENST00000570253 PPP2R5CQ13362 524 aa23.56■■□□□ 1.36
PKD1-240ENST00000570253 TMC5Q6UXY8 1006 aa23.56■■□□□ 1.36
PKD1-240ENST00000570253 TMEM173Q86WV6 379 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms