RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	TMEM117	Q9H0C3	514 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	CLIC4	Q9Y696	253 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	CNTNAP2	Q9UHC6	1331 aa		19.9	■□□□□ 0.78
PKD1-238	ENST00000570150	SPTLC2	O15270	562 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	MYOG	P15173	224 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	GLRA2	P23416	452 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	CAPS	Q13938	189 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	FAM187B	Q17R55	369 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	TMEM119	Q4V9L6	283 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	CDCA2	Q69YH5	1023 aa	Predicted RBP	19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	PPP4R3CP	Q6ZMV5	832 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	ECHDC2	Q86YB7	292 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	KSR1	Q8IVT5	923 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	LINC01599	Q8WXQ3	324 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	CLP1	Q92989	425 aa	Known RBP	19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	MMTAG2	Q9BU76	263 aa	Known RBP	19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	BMP2K	Q9NSY1	1161 aa	Predicted RBP	19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	LARS	Q9P2J5	1176 aa	Known RBP	19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	STK39	Q9UEW8	545 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	ODF2L	Q9ULJ1	636 aa		19.89	■□□□□ 0.77
PKD1-238	ENST00000570150	MICAL3	Q7RTP6	2002 aa		19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	LINC00301	Q8NCQ3	95 aa		19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	FBXO22	Q8NEZ5	403 aa		19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	ARNTL2	Q8WYA1	636 aa		19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	USP28	Q96RU2	1077 aa		19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	TRIM6	Q9C030	488 aa	Predicted RBP	19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	LMAN2L	Q9H0V9	348 aa		19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	RC3H2	Q9HBD1	1191 aa	Known RBP	19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	KANSL3	Q9P2N6	904 aa		19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	FBXO2	Q9UK22	296 aa	Predicted RBP	19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	PCDHB12	Q9Y5F1	795 aa		19.88	■□□□□ 0.77
PKD1-238	ENST00000570150	ZMYM2	Q9UBW7	1377 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	PP2D1	A8MPX8	630 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150		E9PMD0	336 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	C5orf67	F2Z3F1	127 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	PLA2G4B	P0C869	781 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	CDC25A	P30304	524 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	DDIT3	P35638	169 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	RINT1	Q6NUQ1	792 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	GLB1L	Q6UWU2	654 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	TMEM192	Q8IY95	271 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	LRRC43	Q8N309	656 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	P2RX5	Q93086	422 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	ADPGK	Q9BRR6	497 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	CSRNP2	Q9H175	543 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	CUEDC2	Q9H467	287 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	PRDM12	Q9H4Q4	367 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	FAM105A	Q9NUU6	356 aa		19.87	■□□□□ 0.77
PKD1-238	ENST00000570150	EVPL	Q92817	2033 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	LOXHD1	Q8IVV2	1947 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	MGEA5	O60502	916 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	SSB	P05455	408 aa	Known RBP eCLIP	19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	LAG3	P18627	525 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	MARCKS	P29966	332 aa	Predicted RBP	19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	PPM1A	P35813	382 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	BMPR1A	P36894	532 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	NUCB2	P80303	420 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	CEBPZ	Q03701	1054 aa	Known RBP	19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	MBTD1	Q05BQ5	628 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	GRB10	Q13322	594 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	ECM1	Q16610	540 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	TMEM132A	Q24JP5	1023 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	RRAGB	Q5VZM2	374 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	C1orf186	Q6ZWK4	172 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	MAEA	Q7L5Y9	396 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	MAFA	Q8NHW3	353 aa	Predicted RBP	19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	ASAP3	Q8TDY4	903 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	SPIRE2	Q8WWL2	714 aa		19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	LARP4B	Q92615	738 aa	Known RBP	19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	ZNF668	Q96K58	619 aa	Predicted RBP	19.86	■□□□□ 0.77
PKD1-238	ENST00000570150	TTC3	P53804	2025 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	LCHN	A4D1U4	455 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150		K7ERI5	159 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	N4BP3	O15049	544 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	CUTA	O60888	179 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	KRT18	P05783	430 aa	Known RBP	19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	PRPF4B	Q13523	1007 aa	Known RBP	19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	BMS1	Q14692	1282 aa	Known RBP	19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	EPC2	Q52LR7	807 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	SLC27A1	Q6PCB7	646 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	TMCO2	Q7Z6W1	182 aa	Predicted RBP	19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	URGCP	Q8TCY9	931 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	RAD54L	Q92698	747 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	PPP2R3C	Q969Q6	453 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	PNMA5	Q96PV4	448 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	NTPCR	Q9BSD7	190 aa	Known RBP	19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	FZD8	Q9H461	694 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	TMEM134	Q9H6X4	195 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	PCDHB2	Q9Y5E7	798 aa		19.85	■□□□□ 0.77
PKD1-238	ENST00000570150	SI	P14410	1827 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150		A0A0C4DFX4	3053 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150		A0A1B0GUA9	196 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	FSD2	A1L4K1	749 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	TBKBP1	A7MCY6	615 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150		H3BNC9	293 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	ACKR2	O00590	384 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	TSPAN1	O60635	241 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	BRD1	O95696	1058 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	PLS3	P13797	630 aa		19.84	■□□□□ 0.77
PKD1-238	ENST00000570150	IGFBP4	P22692	258 aa		19.84	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms