RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SLC4A7Q9Y6M7 1214 aa5.45□□□□□ -1.54
CNOT1-219ENST00000569882 TANC1Q9C0D5 1861 aa5.45□□□□□ -1.54
CNOT1-219ENST00000569882 NID2Q14112 1375 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 M0R2N6 131 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 IPO5O00410 1097 aaKnown RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 PFKFB2O60825 505 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 BAG4O95429 457 aaKnown RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 CD4P01730 458 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 PSAPP07602 524 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 CTSHP09668 335 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 ITGB5P18084 799 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 IBSPP21815 317 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 KRT2P35908 639 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 STAT5BP51692 787 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 ACTR2P61160 394 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 SP2Q02086 613 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 SCRN1Q12765 414 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 PTK7Q13308 1070 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 SCN5AQ14524 2016 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 RAB30Q15771 203 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 LETM2Q2VYF4 491 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 LRIT3Q3SXY7 679 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 C9orf50Q5SZB4 431 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 LRCH2Q5VUJ6 765 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 ZNF365Q70YC5 407 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 RAB44Q7Z6P3 723 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 CCDC83Q8IWF9 413 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 FAM177A1Q8N128 213 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 TBCKQ8TEA7 893 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 SCG3Q8WXD2 468 aaKnown RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 GTF3C6Q969F1 213 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 ZSCAN31Q96LW9 406 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 TEKT3Q9BXF9 490 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 AGXT2Q9BYV1 514 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 FAM49AQ9H0Q0 323 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 SLC28A3Q9HAS3 691 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 AGO4Q9HCK5 861 aaKnown RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 NEUROD4Q9HD90 331 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 ZFP64Q9NPA5 681 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 ZNF302Q9NR11 478 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 SH2B1Q9NRF2 756 aaPredicted RBP5.44□□□□□ -1.54
CNOT1-219ENST00000569882 TBC1D22BQ9NU19 505 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 TUBE1Q9UJT0 475 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 TPCN1Q9ULQ1 816 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 KCNJ14Q9UNX9 436 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 GINS2Q9Y248 185 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 UBIAD1Q9Y5Z9 338 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 NFASCO94856 1347 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 UMODL1Q5DID0 1318 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 EMSYQ7Z589 1322 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 NRCAMQ92823 1304 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 STK36Q9NRP7 1315 aa5.44□□□□□ -1.54
CNOT1-219ENST00000569882 RRN3P2A6NIE6 340 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 WDR64B1ANS9 1081 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 RSPH10B2B2RC85 870 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 H3BQV1 296 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 GNB5O14775 395 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 CCNT1O60563 726 aaKnown RBP5.43□□□□□ -1.54
CNOT1-219ENST00000569882 EFCAB14O75071 495 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 ATP9AO75110 1047 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 AMHP03971 560 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 RPLP2P05387 115 aaKnown RBP5.43□□□□□ -1.54
CNOT1-219ENST00000569882 HSP90AA1P07900 732 aaKnown RBP5.43□□□□□ -1.54
CNOT1-219ENST00000569882 IQCF3P0C7M6 154 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 RSPH10BP0C881 870 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 ARP10275 920 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 CKBP12277 381 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 GCFC2P16383 781 aaKnown RBP5.43□□□□□ -1.54
CNOT1-219ENST00000569882 KCNA2P16389 499 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 ATP2A2P16615 1042 aaKnown RBP5.43□□□□□ -1.54
CNOT1-219ENST00000569882 ATP2B1P20020 1258 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 ITGB8P26012 769 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 TMOD1P28289 359 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 SLC26A2P50443 739 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 USP11P51784 963 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 JAK3P52333 1124 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 EVCP57679 992 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 HMGN5P82970 282 aaKnown RBP5.43□□□□□ -1.54
CNOT1-219ENST00000569882 SMAD3P84022 425 aaKnown RBP5.43□□□□□ -1.54
CNOT1-219ENST00000569882 IKBKEQ14164 716 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 RABEP1Q15276 862 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 GRIK4Q16099 956 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 NTRK3Q16288 839 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 PKN1Q16512 942 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 INF2Q27J81 1249 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 IER5Q5VY09 327 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 TAF2Q6P1X5 1199 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 PIK3AP1Q6ZUJ8 805 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 NIPA1Q7RTP0 329 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 MIER3Q7Z3K6 550 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 NEK8Q86SG6 692 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 SESTD1Q86VW0 696 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 SMAP1Q8IYB5 467 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-219ENST00000569882 METTL13Q8N6R0 699 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 SLC43A3Q8NBI5 491 aa5.43□□□□□ -1.54
CNOT1-219ENST00000569882 CYP2W1Q8TAV3 490 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms