RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 RPGRQ92834 1020 aaKnown RBP6.9□□□□□ -1.3
CHD9-220ENST00000569794 DEPDC7Q96QD5 511 aa6.9□□□□□ -1.3
CHD9-220ENST00000569794 TUBGCP5Q96RT8 1024 aa6.9□□□□□ -1.3
CHD9-220ENST00000569794 CHMP4AQ9BY43 222 aa6.9□□□□□ -1.3
CHD9-220ENST00000569794 COL4A3Q01955 1670 aa6.9□□□□□ -1.31
CHD9-220ENST00000569794 CCDC163A0A0D9SF12 145 aa6.89□□□□□ -1.31
CHD9-220ENST00000569794 MASP2O00187 686 aa6.89□□□□□ -1.31
CHD9-220ENST00000569794 TRIM24O15164 1050 aa6.89□□□□□ -1.31
CHD9-220ENST00000569794 HK1P19367 917 aa6.89□□□□□ -1.31
CHD9-220ENST00000569794 MYBPC3Q14896 1274 aa6.89□□□□□ -1.31
CHD9-220ENST00000569794 TIGD2Q4W5G0 525 aa6.89□□□□□ -1.31
CHD9-220ENST00000569794 HECTD2Q5U5R9 776 aa6.89□□□□□ -1.31
CHD9-220ENST00000569794 JMYQ8N9B5 988 aa6.89□□□□□ -1.31
CHD9-220ENST00000569794 BBC3Q96PG8 261 aaPredicted RBP6.89□□□□□ -1.31
CHD9-220ENST00000569794 PITHD1Q9GZP4 211 aaPredicted RBP6.89□□□□□ -1.31
CHD9-220ENST00000569794 PCIF1Q9H4Z3 704 aa6.89□□□□□ -1.31
CHD9-220ENST00000569794 GLRX3O76003 335 aaKnown RBP6.88□□□□□ -1.31
CHD9-220ENST00000569794 RECQL4O94761 1208 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 SCAF4O95104 1147 aaKnown RBP6.88□□□□□ -1.31
CHD9-220ENST00000569794 CYP17A1P05093 508 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 EPHA7Q15375 998 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 FAM214AQ32MH5 1076 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 OLFML1Q6UWY5 402 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 DDX53Q86TM3 631 aaKnown RBP6.88□□□□□ -1.31
CHD9-220ENST00000569794 NME9Q86XW9 330 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 ADGRG3Q86Y34 549 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 FAM177A1Q8N128 213 aaPredicted RBP6.88□□□□□ -1.31
CHD9-220ENST00000569794 CHST14Q8NCH0 376 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 BEND2Q8NDZ0 799 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 ZSWIM2Q8NEG5 633 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 SYNPO2LQ9H987 977 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 SNTG2Q9NY99 539 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 SYNPO2Q9UMS6 1093 aa6.88□□□□□ -1.31
CHD9-220ENST00000569794 A0A0A6YYJ9 748 aa6.87□□□□□ -1.31
CHD9-220ENST00000569794 PTX3P26022 381 aaPredicted RBP6.87□□□□□ -1.31
CHD9-220ENST00000569794 C21orf58P58505 322 aa6.87□□□□□ -1.31
CHD9-220ENST00000569794 ZCCHC8Q6NZY4 707 aaKnown RBP6.87□□□□□ -1.31
CHD9-220ENST00000569794 KANSL1Q7Z3B3 1105 aa6.87□□□□□ -1.31
CHD9-220ENST00000569794 KIAA1958Q8N8K9 716 aa6.87□□□□□ -1.31
CHD9-220ENST00000569794 DNAJC7Q99615 494 aa6.87□□□□□ -1.31
CHD9-220ENST00000569794 OSBPL6Q9BZF3 934 aa6.87□□□□□ -1.31
CHD9-220ENST00000569794 ZNF768Q9H5H4 540 aaKnown RBP6.87□□□□□ -1.31
CHD9-220ENST00000569794 CENPVL1A0A0U1RR11 272 aa6.86□□□□□ -1.31
CHD9-220ENST00000569794 HOXA3O43365 443 aaPredicted RBP6.86□□□□□ -1.31
CHD9-220ENST00000569794 GYPEP15421 78 aa6.86□□□□□ -1.31
CHD9-220ENST00000569794 LAG3P18627 525 aa6.86□□□□□ -1.31
CHD9-220ENST00000569794 ATP2B1P20020 1258 aa6.86□□□□□ -1.31
CHD9-220ENST00000569794 ATXN1P54253 815 aaKnown RBP6.86□□□□□ -1.31
CHD9-220ENST00000569794 TAP1Q03518 808 aa6.86□□□□□ -1.31
CHD9-220ENST00000569794 CSRP2Q16527 193 aa6.86□□□□□ -1.31
CHD9-220ENST00000569794 FAM193BQ96PV7 902 aaPredicted RBP6.86□□□□□ -1.31
CHD9-220ENST00000569794 ENKD1Q9H0I2 346 aa6.86□□□□□ -1.31
CHD9-220ENST00000569794 KCNH6Q9H252 994 aa6.86□□□□□ -1.31
CHD9-220ENST00000569794 MTG2Q9H4K7 406 aa6.86□□□□□ -1.31
CHD9-220ENST00000569794 NCOA5Q9HCD5 579 aaKnown RBP6.86□□□□□ -1.31
CHD9-220ENST00000569794 SAMD15Q9P1V8 674 aa6.86□□□□□ -1.31
CHD9-220ENST00000569794 A0A0A6YYK5 440 aaPredicted RBP6.85□□□□□ -1.31
CHD9-220ENST00000569794 PTPDC1A2A3K4 754 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 AHRRA9YTQ3 701 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 H7C1D1 291 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 PTTG1IPP53801 180 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 ADCY2Q08462 1091 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 MAN2A1Q16706 1144 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 NAALADL2Q58DX5 795 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 METTL24Q5JXM2 366 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 STRIP1Q5VSL9 837 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 SYCE2Q6PIF2 218 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 MYEOVQ96EZ4 313 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 CPPED1Q9BRF8 314 aaPredicted RBP6.85□□□□□ -1.31
CHD9-220ENST00000569794 SOX7Q9BT81 388 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 CPEB1Q9BZB8 566 aaKnown RBP6.85□□□□□ -1.31
CHD9-220ENST00000569794 CYP4F11Q9HBI6 524 aa6.85□□□□□ -1.31
CHD9-220ENST00000569794 B4E1Z4 1266 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 KIAA0355O15063 1070 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 FSBPO95073 299 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 CFBP00751 764 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 ZNF174Q15697 407 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 Q6YL49 198 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 OR52N2Q8NGI0 321 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 NAF1Q96HR8 494 aaKnown RBP6.84□□□□□ -1.31
CHD9-220ENST00000569794 UIMC1Q96RL1 719 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 PDCD2LQ9BRP1 358 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 SLC46A2Q9BY10 475 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 TANGO6Q9C0B7 1094 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 ADARB2Q9NS39 739 aaKnown RBP6.84□□□□□ -1.31
CHD9-220ENST00000569794 ING3Q9NXR8 418 aa6.84□□□□□ -1.31
CHD9-220ENST00000569794 EIF2B4Q9UI10 523 aaKnown RBP6.84□□□□□ -1.31
CHD9-220ENST00000569794 TNPO3Q9Y5L0 923 aaKnown RBP6.84□□□□□ -1.31
CHD9-220ENST00000569794 NRP1O14786 923 aa6.83□□□□□ -1.32
CHD9-220ENST00000569794 MAFGO15525 162 aa6.83□□□□□ -1.32
CHD9-220ENST00000569794 LPXNO60711 386 aa6.83□□□□□ -1.32
CHD9-220ENST00000569794 OPHN1O60890 802 aa6.83□□□□□ -1.32
CHD9-220ENST00000569794 GAAP10253 952 aa6.83□□□□□ -1.32
CHD9-220ENST00000569794 CLK3P49761 638 aaKnown RBP6.83□□□□□ -1.32
CHD9-220ENST00000569794 FAM189BP81408 668 aa6.83□□□□□ -1.32
CHD9-220ENST00000569794 ADCY1Q08828 1119 aa6.83□□□□□ -1.32
CHD9-220ENST00000569794 COLEC12Q5KU26 742 aa6.83□□□□□ -1.32
CHD9-220ENST00000569794 ESRP1Q6NXG1 681 aaKnown RBP6.83□□□□□ -1.32
CHD9-220ENST00000569794 HIRIP3Q9BW71 556 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms