RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 TSHZ2Q9NRE2 1034 aa21.7■■□□□ 1.06
CDH11-218ENST00000569783 FAM105AQ9NUU6 356 aa21.7■■□□□ 1.06
CDH11-218ENST00000569783 INPP5FQ9Y2H2 1132 aa21.7■■□□□ 1.06
CDH11-218ENST00000569783 WDR81Q562E7 1941 aa21.7■■□□□ 1.06
CDH11-218ENST00000569783 P4HBP07237 508 aaKnown RBP21.69■■□□□ 1.06
CDH11-218ENST00000569783 POLGP54098 1239 aaPredicted RBP21.69■■□□□ 1.06
CDH11-218ENST00000569783 GIT2Q14161 759 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 PTPN21Q16825 1174 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 LONRF3Q496Y0 759 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 NOMO2Q5JPE7 1267 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 PPP4R3AQ6IN85 833 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 KSR1Q8IVT5 923 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 VPS52Q8N1B4 723 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 FBXL6Q8N531 539 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 LPPQ93052 612 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 CEP170P1Q96L14 293 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 PHF20Q9BVI0 1012 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 PPME1Q9Y570 386 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 COL4A3BPQ9Y5P4 624 aa21.69■■□□□ 1.06
CDH11-218ENST00000569783 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.68■■□□□ 1.06
CDH11-218ENST00000569783 EML1O00423 815 aa21.68■■□□□ 1.06
CDH11-218ENST00000569783 CCNT1O60563 726 aaKnown RBP21.68■■□□□ 1.06
CDH11-218ENST00000569783 CLASP2O75122 1294 aaKnown RBP21.68■■□□□ 1.06
CDH11-218ENST00000569783 ZNF623O75123 536 aa21.68■■□□□ 1.06
CDH11-218ENST00000569783 SP100P23497 879 aaPredicted RBP21.68■■□□□ 1.06
CDH11-218ENST00000569783 URGCPQ8TCY9 931 aa21.68■■□□□ 1.06
CDH11-218ENST00000569783 PSPC1Q8WXF1 523 aaKnown RBP21.68■■□□□ 1.06
CDH11-218ENST00000569783 ADAM7Q9H2U9 754 aa21.68■■□□□ 1.06
CDH11-218ENST00000569783 KCNMB3Q9NPA1 279 aa21.68■■□□□ 1.06
CDH11-218ENST00000569783 TBC1D13Q9NVG8 400 aa21.68■■□□□ 1.06
CDH11-218ENST00000569783 TECTAO75443 2155 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 RFC5P40937 340 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 NPEPPSP55786 919 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 SCRN1Q12765 414 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 OTUD6AQ7L8S5 288 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 DDX53Q86TM3 631 aaKnown RBP21.67■■□□□ 1.06
CDH11-218ENST00000569783 IGSF21Q96ID5 467 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 RIPOR3Q96MK2 946 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 GBP3Q9H0R5 595 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 ZBP1Q9H171 429 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 NRDE2Q9H7Z3 1164 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 VAV3Q9UKW4 847 aa21.67■■□□□ 1.06
CDH11-218ENST00000569783 STK36Q9NRP7 1315 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 TBX3O15119 743 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 OFD1O75665 1012 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 GALTP07902 379 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 CTSAP10619 480 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 MTHFRP42898 656 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 PTPN5P54829 565 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 PIK3AP1Q6ZUJ8 805 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 SRGAP1Q7Z6B7 1085 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 TCP11Q8WWU5 503 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 IFT122Q9HBG6 1241 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 AGPAT5Q9NUQ2 364 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 DZANK1Q9NVP4 752 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 STK39Q9UEW8 545 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 PCDHB2Q9Y5E7 798 aa21.66■■□□□ 1.06
CDH11-218ENST00000569783 GAS2O43903 313 aaKnown RBP21.65■■□□□ 1.06
CDH11-218ENST00000569783 BAG4O95429 457 aaKnown RBP21.65■■□□□ 1.06
CDH11-218ENST00000569783 SRGAP2CP0DJJ0 459 aa21.65■■□□□ 1.06
CDH11-218ENST00000569783 EPHA7Q15375 998 aa21.65■■□□□ 1.06
CDH11-218ENST00000569783 C4orf19Q8IY42 314 aa21.65■■□□□ 1.06
CDH11-218ENST00000569783 PRPF31Q8WWY3 499 aaKnown RBP21.65■■□□□ 1.06
CDH11-218ENST00000569783 WASF1Q92558 559 aa21.65■■□□□ 1.06
CDH11-218ENST00000569783 FAM193BQ96PV7 902 aaPredicted RBP21.65■■□□□ 1.06
CDH11-218ENST00000569783 LXNQ9BS40 222 aa21.65■■□□□ 1.06
CDH11-218ENST00000569783 POMKQ9H5K3 350 aa21.65■■□□□ 1.06
CDH11-218ENST00000569783 DHX33Q9H6R0 707 aaKnown RBP21.65■■□□□ 1.06
CDH11-218ENST00000569783 IRAK3Q9Y616 596 aa21.65■■□□□ 1.06
CDH11-218ENST00000569783 ASAP2O43150 1006 aa21.64■■□□□ 1.05
CDH11-218ENST00000569783 YWHABP31946 246 aaKnown RBP21.64■■□□□ 1.05
CDH11-218ENST00000569783 ATAT1Q5SQI0 421 aa21.64■■□□□ 1.05
CDH11-218ENST00000569783 RARS2Q5T160 578 aaKnown RBP21.64■■□□□ 1.05
CDH11-218ENST00000569783 NCAPH2Q6IBW4 605 aa21.64■■□□□ 1.05
CDH11-218ENST00000569783 PPFIBP1Q86W92 1011 aa21.64■■□□□ 1.05
CDH11-218ENST00000569783 TMEM173Q86WV6 379 aaPredicted RBP21.64■■□□□ 1.05
CDH11-218ENST00000569783 SLFN12Q8IYM2 578 aa21.64■■□□□ 1.05
CDH11-218ENST00000569783 AUTS2Q8WXX7 1259 aa21.64■■□□□ 1.05
CDH11-218ENST00000569783 TMEM143Q96AN5 459 aa21.64■■□□□ 1.05
CDH11-218ENST00000569783 BRMS1Q9HCU9 246 aa21.64■■□□□ 1.05
CDH11-218ENST00000569783 KANSL3Q9P2N6 904 aa21.64■■□□□ 1.05
CDH11-218ENST00000569783 CNTNAP2Q9UHC6 1331 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 SPDYE4A6NLX3 237 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 MEIS3P2A8K0S8 358 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 LAMTOR4Q0VGL1 99 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 MTMR3Q13615 1198 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 XKR9Q5GH70 373 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 IER5LQ5T953 404 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 ZNF579Q8NAF0 562 aaKnown RBP21.63■■□□□ 1.05
CDH11-218ENST00000569783 KREMEN2Q8NCW0 462 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 PRSS33Q8NF86 280 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 ASIC4Q96FT7 647 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 ZSWIM4Q9H7M6 989 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 RSAD1Q9HA92 442 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 BMP2KQ9NSY1 1161 aaPredicted RBP21.63■■□□□ 1.05
CDH11-218ENST00000569783 DNAJB4Q9UDY4 337 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 CDH22Q9UJ99 828 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 DBR1Q9UK59 544 aaKnown RBP21.63■■□□□ 1.05
CDH11-218ENST00000569783 SORCS3Q9UPU3 1222 aa21.63■■□□□ 1.05
CDH11-218ENST00000569783 ZNF318Q5VUA4 2279 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms