RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 NRDCO43847 1150 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 AFPP02771 609 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 MMP3P08254 477 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 ZNF865P0CJ78 1059 aaPredicted RBP11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 FECHP22830 423 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 CNGA1P29973 690 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 IGBP1P78318 339 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 TNFAIP2Q03169 654 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 MSL3Q8N5Y2 521 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 PRPF31Q8WWY3 499 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 HVCN1Q96D96 273 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 APBA2Q99767 749 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 LSM14BQ9BX40 385 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 METTL14Q9HCE5 456 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 FRMD4BQ9Y2L6 1034 aa11.96□□□□□ -0.49
PDXDC1-216ENST00000569715 DNAH12Q6ZR08 3092 aa11.96□□□□□ -0.5
PDXDC1-216ENST00000569715 NOL4O94818 638 aa11.96□□□□□ -0.5
PDXDC1-216ENST00000569715 RGS2P41220 211 aa11.96□□□□□ -0.5
PDXDC1-216ENST00000569715 NAMPTP43490 491 aa11.96□□□□□ -0.5
PDXDC1-216ENST00000569715 C12orf56Q8IXR9 622 aa11.96□□□□□ -0.5
PDXDC1-216ENST00000569715 SAAL1Q96ER3 474 aa11.96□□□□□ -0.5
PDXDC1-216ENST00000569715 CCDC51Q96ER9 411 aa11.96□□□□□ -0.5
PDXDC1-216ENST00000569715 ZNF668Q96K58 619 aaPredicted RBP11.96□□□□□ -0.5
PDXDC1-216ENST00000569715 C16orf45Q96MC5 204 aaPredicted RBP11.96□□□□□ -0.5
PDXDC1-216ENST00000569715 IGKV6-21A0A0C4DH24 114 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 ADRB2P07550 413 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 SLC26A2P50443 739 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 DLG4P78352 724 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 IQSEC1Q6DN90 963 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 WDR59Q6PJI9 974 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 PLEKHO2Q8TD55 490 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 PPP1R13LQ8WUF5 828 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 CHP1Q99653 195 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 NUP58Q9BVL2 599 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 HNRNPDLO14979 420 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 HBP1O60381 514 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 ACTN1P12814 892 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 INSRRP14616 1297 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 KCNJ6P48051 423 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 CLCN3P51790 818 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 FIGNQ5HY92 759 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 RETREG2Q8NC44 543 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 DEPTORQ8TB45 409 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 PPP1R13BQ96KQ4 1090 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 CAPNS2Q96L46 248 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 EXOC7Q9UPT5 735 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 IGHA2P01877 340 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 SLC9A1P19634 815 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 DPY19L2P1Q6NXN4 242 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 CBWD2Q8IUF1 395 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 XXYLT1Q8NBI6 393 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 OR8K1Q8NGG5 319 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 SOCS4Q8WXH5 440 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 BICD1Q96G01 975 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 GABRQQ9UN88 632 aa11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 GNEQ9Y223 722 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-216ENST00000569715 A0A1W2PQJ5 194 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 DYNC1LI2O43237 492 aaPredicted RBP11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 C22orf31O95567 290 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 ZBED6P86452 979 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 BFSP1Q12934 665 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 MYBPC2Q14324 1141 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 CBWD6Q4V339 395 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 CBWD3Q5JTY5 395 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 CBWD5Q5RIA9 395 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 NEK11Q8NG66 645 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 BAP1Q92560 729 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 PPFIA4O75335 1185 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 HOXD8P13378 290 aaPredicted RBP11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 PSMC4P43686 418 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 LAMTOR4Q0VGL1 99 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 NOGQ13253 232 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 PPP2R5AQ15172 486 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 TMEM174Q8WUU8 243 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 NLRC4Q9NPP4 1024 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 CGNQ9P2M7 1197 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 BRCA2P51587 3418 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 KAT6AQ92794 2004 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 A0A0U1RQJ8 604 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 H3BRB1 525 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 SRGAP2CP0DJJ0 459 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 METTL13Q8N6R0 699 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 ATRIPQ8WXE1 791 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 NAA15Q9BXJ9 866 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 HAPLN2Q9GZV7 340 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 GANQ9H2C0 597 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 TUT1Q9H6E5 874 aaKnown RBP11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 KCND1Q9NSA2 647 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 PPME1Q9Y570 386 aa11.94□□□□□ -0.5
PDXDC1-216ENST00000569715 LRRC53A6NM62 1247 aa11.93□□□□□ -0.5
PDXDC1-216ENST00000569715 TBC1D8O95759 1140 aa11.93□□□□□ -0.5
PDXDC1-216ENST00000569715 LACTBP83111 547 aaPredicted RBP11.93□□□□□ -0.5
PDXDC1-216ENST00000569715 PPP2R3AQ06190 1150 aa11.93□□□□□ -0.5
PDXDC1-216ENST00000569715 C1orf220Q5T0J3 134 aa11.93□□□□□ -0.5
PDXDC1-216ENST00000569715 IER5Q5VY09 327 aa11.93□□□□□ -0.5
PDXDC1-216ENST00000569715 EFCAB12Q6NXP0 572 aa11.93□□□□□ -0.5
PDXDC1-216ENST00000569715 TLK2Q86UE8 772 aa11.93□□□□□ -0.5
PDXDC1-216ENST00000569715 PSPC1Q8WXF1 523 aaKnown RBP11.93□□□□□ -0.5
PDXDC1-216ENST00000569715 POMGNT1Q8WZA1 660 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms