RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 HSD17B4P51659 736 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 ZNF543Q08ER8 600 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 DDX10Q13206 875 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 CLLU1OSQ5K130 101 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 HEATR6Q6AI08 1181 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 KBTBD6Q86V97 674 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 DEFB124Q8NES8 71 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 TMEM40Q8WWA1 233 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 GAB3Q8WWW8 586 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 DNASE1L2Q92874 299 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 ZBTB10Q96DT7 871 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 ZC3H10Q96K80 434 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 PHF20Q9BVI0 1012 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 VN1R3Q9BXE9 311 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 PRKD2Q9BZL6 878 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 TMEM9BQ9NQ34 198 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 ZDHHC7Q9NXF8 308 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 MAP3K20Q9NYL2 800 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 NDRG2Q9UN36 371 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 RAXQ9Y2V3 346 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 MRPL11Q9Y3B7 192 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 TELO2Q9Y4R8 837 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 SMIM35A0A1B0GVV1 85 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 SPATA31C2B4DYI2 1134 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 CDX4O14627 284 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 BCAR3O75815 825 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 AKAP3O75969 853 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 GLUD1P00367 558 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 ADH1AP07327 375 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 SNHG28P0DPA3 235 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 CHRNB1P11230 501 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 TOP1P11387 765 aaKnown RBP7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 FSHRP23945 695 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 CCND2P30279 289 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 TCF7P36402 384 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 IGBP1P78318 339 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 SEMA3FQ13275 785 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 GNPTABQ3T906 1256 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 CCDC184Q52MB2 194 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 ZSCAN25Q6NSZ9 544 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 RAB44Q7Z6P3 723 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 ECHDC2Q86YB7 292 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 CHCHD4Q8N4Q1 142 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 IL31RAQ8NI17 732 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 BCL7CQ8WUZ0 217 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 RSPH1Q8WYR4 309 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 ARHGAP45Q92619 1136 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 FGF13Q92913 245 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 SENP7Q9BQF6 1050 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 PLEKHA4Q9H4M7 779 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 SLC32A1Q9H598 525 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 JADE2Q9NQC1 790 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 MRPL17Q9NRX2 175 aaKnown RBP7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 DKK4Q9UBT3 224 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 PCDHA1Q9Y5I3 950 aa7.66□□□□□ -1.18
HERPUD1-217ENST00000569429 FLNCQ14315 2725 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 A0A087WV48 116 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 CCDC163A0A0D9SF12 145 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 ZC3H11AO75152 810 aaKnown RBP eCLIP7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 POLQO75417 2590 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 RPP40O75818 363 aaKnown RBP7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 STAM2O75886 525 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 CFBP00751 764 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 GALTP07902 379 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 INSRRP14616 1297 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 GNAT2P19087 354 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 MARK3P27448 753 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 PTGDRQ13258 359 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 CDC37Q16543 378 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 PDXDC2PQ6P474 469 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 FAM228AQ86W67 206 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 ERC1Q8IUD2 1116 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 SAMD3Q8N6K7 520 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 FAM3CQ92520 227 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 TNPO1Q92973 898 aaKnown RBP7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 CRELD1Q96HD1 420 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 INPP4AQ96PE3 977 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 KXD1Q9BQD3 176 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 TMEM47Q9BQJ4 181 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 SMARCAD1Q9H4L7 1026 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 CDHR5Q9HBB8 845 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 SSX2IPQ9Y2D8 614 aa7.65□□□□□ -1.18
HERPUD1-217ENST00000569429 CABIN1Q9Y6J0 2220 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 VWA8A3KMH1 1905 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 ADAMTS9Q9P2N4 1935 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 ZFHX3Q15911 3703 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 PATL2C9JE40 543 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 CAPN9O14815 690 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 OPLAHO14841 1288 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 TEX28O15482 410 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 FIBPO43427 364 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 ECI2O75521 394 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 CAVIN2O95810 425 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 SIM1P81133 766 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 PLCB2Q00722 1185 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 PPARAQ07869 468 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 ZNF423Q2M1K9 1284 aa7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 GPATCH4Q5T3I0 446 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-217ENST00000569429 CCNI2Q6ZMN8 369 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms