RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 MAEAQ7L5Y9 396 aa16.07■□□□□ 0.16
COMMD4-225ENST00000569245 SRGAP1Q7Z6B7 1085 aa16.07■□□□□ 0.16
COMMD4-225ENST00000569245 LINC00301Q8NCQ3 95 aa16.07■□□□□ 0.16
COMMD4-225ENST00000569245 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-225ENST00000569245 HLA-CQ95604 372 aa16.07■□□□□ 0.16
COMMD4-225ENST00000569245 SPATA32Q96LK8 384 aa16.07■□□□□ 0.16
COMMD4-225ENST00000569245 XPNPEP1Q9NQW7 623 aa16.07■□□□□ 0.16
COMMD4-225ENST00000569245 PCDHB12Q9Y5F1 795 aa16.07■□□□□ 0.16
COMMD4-225ENST00000569245 CLIC4Q9Y696 253 aa16.07■□□□□ 0.16
COMMD4-225ENST00000569245 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
COMMD4-225ENST00000569245 XIRP2A4UGR9 3374 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 COL4A6Q14031 1691 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 ARHGEF35A5YM69 484 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 LAD1O00515 517 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 GRM6O15303 877 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 EOMESO95936 686 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 BMP15O95972 392 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 LINC00271P0C7V0 271 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 SKIP12755 728 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 TFF2Q03403 129 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 NCBP1Q09161 790 aaKnown RBP16.06■□□□□ 0.16
COMMD4-225ENST00000569245 PDIA5Q14554 519 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 SLC39A14Q15043 492 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 AAK1Q2M2I8 961 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 TIGD5Q53EQ6 642 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 TJAP1Q5JTD0 557 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 DTHD1Q6ZMT9 781 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 KLHL23Q8NBE8 558 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 ASB2Q96Q27 587 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 TMEM117Q9H0C3 514 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 ALG13Q9NP73 1137 aaKnown RBP16.06■□□□□ 0.16
COMMD4-225ENST00000569245 TYW1Q9NV66 732 aaKnown RBP16.06■□□□□ 0.16
COMMD4-225ENST00000569245 DBR1Q9UK59 544 aaKnown RBP16.06■□□□□ 0.16
COMMD4-225ENST00000569245 COG5Q9UP83 839 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 STK24Q9Y6E0 443 aa16.06■□□□□ 0.16
COMMD4-225ENST00000569245 VCANP13611 3396 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 ERLIN2O94905 339 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 PTMSP20962 102 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 ARL2P36404 184 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 CEBPZQ03701 1054 aaKnown RBP16.05■□□□□ 0.16
COMMD4-225ENST00000569245 STK38Q15208 465 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 NAALADL2Q58DX5 795 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 KCNG4Q8TDN1 519 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 SNX29Q8TEQ0 813 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 SYMPKQ92797 1274 aaKnown RBP16.05■□□□□ 0.16
COMMD4-225ENST00000569245 CASD1Q96PB1 797 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 COL25A1Q9BXS0 654 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-225ENST00000569245 LMAN2LQ9H0V9 348 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 POLR3FQ9H1D9 316 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-225ENST00000569245 MINDY3Q9H8M7 445 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 GDPD2Q9HCC8 539 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 PLAGL2Q9UPG8 496 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 WDR81Q562E7 1941 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 LOXHD1Q8IVV2 1947 aa16.05■□□□□ 0.16
COMMD4-225ENST00000569245 INO80B-WBP1J3KQ70 363 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 PPP6R2O75170 966 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 PRPHP41219 470 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
COMMD4-225ENST00000569245 KRT79Q5XKE5 535 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 PADI6Q6TGC4 694 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 EP400NLQ6ZTU2 488 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 THNSL1Q8IYQ7 743 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 MCPH1Q8NEM0 835 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 HELQQ8TDG4 1101 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 P2RX5Q93086 422 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 NSUN3Q9H649 340 aaKnown RBP16.04■□□□□ 0.16
COMMD4-225ENST00000569245 GPRC5CQ9NQ84 441 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 LMBRD1Q9NUN5 540 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 AGPAT5Q9NUQ2 364 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 FAM105AQ9NUU6 356 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 KIAA1024Q9UPX6 916 aa16.04■□□□□ 0.16
COMMD4-225ENST00000569245 LRRIQ4A6NIV6 560 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 SPTLC2O15270 562 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 PRPF40AO75400 957 aaKnown RBP16.03■□□□□ 0.16
COMMD4-225ENST00000569245 ITGB1P05556 798 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 LAG3P18627 525 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 MUTP22033 750 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 GLRA2P23416 452 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 RAB27AP51159 221 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 PTENP60484 403 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 CAPSQ13938 189 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 TCEAL5Q5H9L2 206 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 CLLU1OSQ5K130 101 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 ZNF598Q86UK7 904 aaKnown RBP16.03■□□□□ 0.16
COMMD4-225ENST00000569245 LRRC43Q8N309 656 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 IGSF22Q8N9C0 903 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 LPPQ93052 612 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 PGBD4Q96DM1 585 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 TRAIPQ9BWF2 469 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 DDX19AQ9NUU7 478 aaKnown RBP16.03■□□□□ 0.16
COMMD4-225ENST00000569245 RNF19AQ9NV58 838 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 HCSTQ9UBK5 93 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 DNM3Q9UQ16 869 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 PCDHB2Q9Y5E7 798 aa16.03■□□□□ 0.16
COMMD4-225ENST00000569245 COL4A4P53420 1690 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-225ENST00000569245 PP2D1A8MPX8 630 aa16.02■□□□□ 0.16
COMMD4-225ENST00000569245 CYP11B2P19099 503 aa16.02■□□□□ 0.16
COMMD4-225ENST00000569245 CDC25AP30304 524 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms