RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	RAPGEF3	O95398	923 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	VSIG10L2	P0DP72	767 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	RANGAP1	P46060	587 aa	Predicted RBP	5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	MAN2A2	P49641	1150 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	ANTXR2	P58335	489 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	BPIFB4	P59827	614 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	SMAD3	P84022	425 aa	Known RBP	5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	MAN2A1	Q16706	1144 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	UBE2R2	Q712K3	238 aa	Predicted RBP	5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	KANSL1	Q7Z3B3	1105 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	KIF18B	Q86Y91	864 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	PLA2G15	Q8NCC3	412 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	DYDC2	Q96IM9	177 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	TCF25	Q9BQ70	676 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	OSBPL2	Q9H1P3	480 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	IL23A	Q9NPF7	189 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	INTS7	Q9NVH2	962 aa	Known RBP	5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	COX11	Q9Y6N1	276 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	XDH	P47989	1333 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243		A0A0A6YYJ9	748 aa		5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	GRID2IP	A4D2P6	1211 aa		5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	GOLGA8B	A8MQT2	603 aa		5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	IKBKB	O14920	756 aa		5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	CLK3	P49761	638 aa	Known RBP	5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	TIGD7	Q6NT04	549 aa	Predicted RBP	5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	ZZZ3	Q8IYH5	903 aa		5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	KIAA1958	Q8N8K9	716 aa		5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	ANKRD53	Q8N9V6	530 aa		5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	SLC25A43	Q8WUT9	341 aa	Predicted RBP	5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	CLUHP3	Q96NS8	147 aa		5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	KRTAP1-5	Q9BYS1	174 aa		5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	R3HDML	Q9H3Y0	253 aa		5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	C14orf93	Q9H972	538 aa	Known RBP	5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	RBM8A	Q9Y5S9	174 aa	Known RBP	5.11	□□□□□ -1.59
UBR1-209	ENST00000569243	CBX4	O00257	560 aa		5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	PPFIA4	O75335	1185 aa		5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	DNAJC8	O75937	253 aa	Predicted RBP	5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	PTPA	Q15257	358 aa		5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	GPR162	Q16538	588 aa		5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	HECTD2	Q5U5R9	776 aa		5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	NAIF1	Q69YI7	327 aa	Predicted RBP	5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	PHYKPL	Q8IUZ5	450 aa		5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	PROKR1	Q8TCW9	393 aa		5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	LENG9	Q96B70	501 aa		5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	RPL10L	Q96L21	214 aa	Known RBP	5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	TUBGCP5	Q96RT8	1024 aa		5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	SPO11	Q9Y5K1	396 aa		5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	TNPO3	Q9Y5L0	923 aa	Known RBP	5.1	□□□□□ -1.59
UBR1-209	ENST00000569243	SPATA31A6	Q5VVP1	1343 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	UBE2QL1	A1L167	161 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	GOLGA6L6	A8MZA4	724 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	OPA1	O60313	960 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	MFAP3L	O75121	409 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	KRT37	O76014	449 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	IPO13	O94829	963 aa	Known RBP	5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	KIR2DL3	P43628	341 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	ELAVL1	Q15717	326 aa	Known RBP	5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	METTL24	Q5JXM2	366 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	FKBP15	Q5T1M5	1219 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	RHOU	Q7L0Q8	258 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	MDGA1	Q8NFP4	955 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	PPP1R14C	Q8TAE6	165 aa		5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.09	□□□□□ -1.59
UBR1-209	ENST00000569243	TOX4	O94842	621 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	FSBP	O95073	299 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	PTX3	P26022	381 aa	Predicted RBP	5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	RABGGTB	P53611	331 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	ADCY2	Q08462	1091 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	SQSTM1	Q13501	440 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	LRRC32	Q14392	662 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	MYBPC3	Q14896	1274 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	LY6G5C	Q5SRR4	150 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	PRAMEF9	Q5VWM5	478 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	CMTM4	Q8IZR5	234 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	SYNE4	Q8N205	404 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	ZNF276	Q8N554	614 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	PMFBP1	Q8TBY8	1022 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	GPR87	Q9BY21	358 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	TOR3A	Q9H497	397 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	USP36	Q9P275	1121 aa	Known RBP	5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	TES	Q9UGI8	421 aa	Known RBP	5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	RCAN3	Q9UKA8	241 aa		5.08	□□□□□ -1.6
UBR1-209	ENST00000569243	NRP1	O14786	923 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	POU3F2	P20265	443 aa	Predicted RBP	5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	STAT3	P40763	770 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	SPIDR	Q14159	915 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	CFAP100	Q494V2	611 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	RABL3	Q5HYI8	236 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	PIK3R6	Q5UE93	754 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	SP5	Q6BEB4	398 aa	Predicted RBP	5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	KIAA1841	Q6NSI8	718 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	C7orf31	Q8N865	590 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	ELF4	Q99607	663 aa	Predicted RBP	5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	PDCD2L	Q9BRP1	358 aa		5.07	□□□□□ -1.6
UBR1-209	ENST00000569243	PRDM13	Q9H4Q3	707 aa		5.07	□□□□□ -1.6

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