RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 MBD4O95243 580 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 ZFYP08048 801 aaPredicted RBP9.35□□□□□ -0.91
CDH11-216ENST00000569128 SYPP08247 313 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 CPEP16870 476 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 ITGB7P26010 798 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 L1CAMP32004 1257 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 GUCY2FP51841 1108 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 FKBP1AP62942 108 aaKnown RBP9.35□□□□□ -0.91
CDH11-216ENST00000569128 MAP9Q49MG5 647 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 FAM209AQ5JX71 171 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 SRCAPQ6ZRS2 3230 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 CREG2Q8IUH2 290 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 LCORLQ8N3X6 602 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 EXOC2Q96KP1 924 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 MCMBPQ9BTE3 642 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 FOXP3Q9BZS1 431 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 LSG1Q9H089 658 aaKnown RBP9.35□□□□□ -0.91
CDH11-216ENST00000569128 PRDM16Q9HAZ2 1276 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 HELLSQ9NRZ9 838 aa9.35□□□□□ -0.91
CDH11-216ENST00000569128 INTS7Q9NVH2 962 aaKnown RBP9.35□□□□□ -0.91
CDH11-216ENST00000569128 AATFQ9NY61 560 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDH11-216ENST00000569128 PSME4Q14997 1843 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 STXBP3O00186 592 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 GPAA1O43292 621 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 CREB3O43889 395 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 DDNO94850 711 aaPredicted RBP9.34□□□□□ -0.91
CDH11-216ENST00000569128 RASGRP1O95267 797 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 PABPC1P11940 636 aaKnown RBP9.34□□□□□ -0.91
CDH11-216ENST00000569128 VAV1P15498 845 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 BMP8BP34820 402 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 GRIK1P39086 918 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 GMPSP49915 693 aaPredicted RBP9.34□□□□□ -0.91
CDH11-216ENST00000569128 PCBP3P57721 371 aaKnown RBP9.34□□□□□ -0.91
CDH11-216ENST00000569128 MCL1Q07820 350 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 TNIP1Q15025 636 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 CASC1Q6TDU7 716 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 RUFY2Q8WXA3 655 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 STRBPQ96SI9 672 aaKnown RBP9.34□□□□□ -0.91
CDH11-216ENST00000569128 RIOK1Q9BRS2 568 aaKnown RBP9.34□□□□□ -0.91
CDH11-216ENST00000569128 DHRS4Q9BTZ2 278 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 NKX2-4Q9H2Z4 354 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 TCFL5Q9UL49 500 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 PCDHA11Q9Y5I1 949 aa9.34□□□□□ -0.91
CDH11-216ENST00000569128 MROH7-TTC4A0A0A0MT08 1334 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 CCDC171Q6TFL3 1326 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 MYH2Q9UKX2 1941 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 DICER1Q9UPY3 1922 aaKnown RBP9.33□□□□□ -0.92
CDH11-216ENST00000569128 GPR75-ASB3A0A0A6YYF3 556 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 SSU72P8A0A1W2PR75 194 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 FKTNO75072 461 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 LDHCP07864 332 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 SNRPB2P08579 225 aaKnown RBP9.33□□□□□ -0.92
CDH11-216ENST00000569128 FGFR1P11362 822 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 IFNGR1P15260 489 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 CD96P40200 585 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 BTDP43251 543 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 KCNJ6P48051 423 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 RBM5P52756 815 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDH11-216ENST00000569128 GSTO1P78417 241 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 BNIP3Q12983 259 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 CFAP100Q494V2 611 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 APOBEC3HQ6NTF7 200 aaKnown RBP9.33□□□□□ -0.92
CDH11-216ENST00000569128 NSMFQ6X4W1 530 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 TMPRSS7Q7RTY8 843 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 SH3RF3Q8TEJ3 882 aaPredicted RBP9.33□□□□□ -0.92
CDH11-216ENST00000569128 ASB11Q8WXH4 323 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 FCRL3Q96P31 734 aaPredicted RBP9.33□□□□□ -0.92
CDH11-216ENST00000569128 IPO9Q96P70 1041 aaKnown RBP9.33□□□□□ -0.92
CDH11-216ENST00000569128 TARS2Q9BW92 718 aaKnown RBP9.33□□□□□ -0.92
CDH11-216ENST00000569128 SLC12A9Q9BXP2 914 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 MRPL4Q9BYD3 311 aaKnown RBP9.33□□□□□ -0.92
CDH11-216ENST00000569128 VAV3Q9UKW4 847 aa9.33□□□□□ -0.92
CDH11-216ENST00000569128 MRPS23Q9Y3D9 190 aaKnown RBP9.33□□□□□ -0.92
CDH11-216ENST00000569128 GAKO14976 1311 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 TRBV23-1A0A0A0MS06 115 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 SMIM22K7EJ46 135 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 COBLO75128 1261 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 ESR1P03372 595 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 HSPD1P10809 573 aaKnown RBP9.32□□□□□ -0.92
CDH11-216ENST00000569128 HOXC12P31275 282 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 ECI1P42126 302 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 NOP2P46087 812 aaKnown RBP9.32□□□□□ -0.92
CDH11-216ENST00000569128 PRKCQQ04759 706 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 HLTFQ14527 1009 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDH11-216ENST00000569128 HHIPL2Q6UWX4 724 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 NECAB2Q7Z6G3 386 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 LRRTM3Q86VH5 581 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 TICAM2Q86XR7 235 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 SCUBE1Q8IWY4 988 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 AGBL3Q8NEM8 1001 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 SDR42E1Q8WUS8 393 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 TEKT1Q969V4 418 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 PRMT6Q96LA8 375 aaPredicted RBP9.32□□□□□ -0.92
CDH11-216ENST00000569128 ASPSCR1Q9BZE9 553 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 EPB41L4AQ9HCS5 686 aaPredicted RBP9.32□□□□□ -0.92
CDH11-216ENST00000569128 CYP26B1Q9NR63 512 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 CNOT7Q9UIV1 285 aaKnown RBP9.32□□□□□ -0.92
CDH11-216ENST00000569128 RNF112Q9ULX5 631 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 TAF6LQ9Y6J9 622 aa9.32□□□□□ -0.92
CDH11-216ENST00000569128 SLC4A4Q9Y6R1 1079 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms