RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 TMC7Q7Z402 723 aa18.55■□□□□ 0.56
CDR2-207ENST00000569045 TMEM143Q96AN5 459 aa18.55■□□□□ 0.56
CDR2-207ENST00000569045 MSLNLQ96KJ4 702 aa18.55■□□□□ 0.56
CDR2-207ENST00000569045 MTRQ99707 1265 aa18.55■□□□□ 0.56
CDR2-207ENST00000569045 EIF2AK1Q9BQI3 630 aaKnown RBP18.55■□□□□ 0.56
CDR2-207ENST00000569045 TTC12Q9H892 705 aaPredicted RBP18.55■□□□□ 0.56
CDR2-207ENST00000569045 HCN4Q9Y3Q4 1203 aa18.55■□□□□ 0.56
CDR2-207ENST00000569045 PER2O15055 1255 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 DCXO43602 365 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 EYA4O95677 639 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 TXKP42681 527 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 RNASELQ05823 741 aaKnown RBP18.54■□□□□ 0.56
CDR2-207ENST00000569045 SPIRE1Q08AE8 756 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 COASYQ13057 564 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 TFDP1Q14186 410 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 MXD4Q14582 209 aaPredicted RBP18.54■□□□□ 0.56
CDR2-207ENST00000569045 DUSP6Q16828 381 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 TMEM87AQ8NBN3 555 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 URGCPQ8TCY9 931 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 KHSRPQ92945 711 aaKnown RBP eCLIP18.54■□□□□ 0.56
CDR2-207ENST00000569045 TMEM169Q96HH4 297 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 LRFN3Q9BTN0 628 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 BMP2KQ9NSY1 1161 aaPredicted RBP18.54■□□□□ 0.56
CDR2-207ENST00000569045 AGPAT5Q9NUQ2 364 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 FAM105AQ9NUU6 356 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 WRAP73Q9P2S5 460 aaPredicted RBP18.54■□□□□ 0.56
CDR2-207ENST00000569045 PCDHGC5Q9Y5F6 944 aa18.54■□□□□ 0.56
CDR2-207ENST00000569045 C19orf67A6NJJ6 358 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 FSCN2O14926 492 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 ZNF623O75123 536 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 ERLIN2O94905 339 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 SLITRK3O94933 977 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 ATF7P17544 494 aaPredicted RBP18.53■□□□□ 0.56
CDR2-207ENST00000569045 SMC1AQ14683 1233 aaKnown RBP18.53■□□□□ 0.56
CDR2-207ENST00000569045 PCBP1Q15365 356 aaKnown RBP eCLIP18.53■□□□□ 0.56
CDR2-207ENST00000569045 ZNF579Q8NAF0 562 aaKnown RBP18.53■□□□□ 0.56
CDR2-207ENST00000569045 RNF149Q8NC42 400 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 SMRP1Q8NCR6 262 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 C8orf76Q96K31 380 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 LLPHQ9BRT6 129 aaKnown RBP18.53■□□□□ 0.56
CDR2-207ENST00000569045 IFT122Q9HBG6 1241 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 ANKEF1Q9NU02 776 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 CLEC1BQ9P126 229 aa18.53■□□□□ 0.56
CDR2-207ENST00000569045 BARX2Q9UMQ3 279 aaPredicted RBP18.53■□□□□ 0.56
CDR2-207ENST00000569045 ZC3H11AO75152 810 aaKnown RBP eCLIP18.52■□□□□ 0.56
CDR2-207ENST00000569045 LYPLA2O95372 231 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 SEC24BO95487 1268 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 CA8P35219 290 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 PBX3P40426 434 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 BCAR1P56945 870 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 GNL2Q13823 731 aaKnown RBP18.52■□□□□ 0.56
CDR2-207ENST00000569045 NOMO2Q5JPE7 1267 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 FERMT3Q86UX7 667 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 SLC39A11Q8N1S5 342 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 LPPQ93052 612 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 ZSCAN31Q96LW9 406 aaPredicted RBP18.52■□□□□ 0.56
CDR2-207ENST00000569045 INPP5FQ9Y2H2 1132 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 PCDHB2Q9Y5E7 798 aa18.52■□□□□ 0.56
CDR2-207ENST00000569045 DGAT1O75907 488 aa18.51■□□□□ 0.55
CDR2-207ENST00000569045 ATP2B1P20020 1258 aa18.51■□□□□ 0.55
CDR2-207ENST00000569045 HMGN5P82970 282 aaKnown RBP18.51■□□□□ 0.55
CDR2-207ENST00000569045 LONRF3Q496Y0 759 aa18.51■□□□□ 0.55
CDR2-207ENST00000569045 CCDC83Q8IWF9 413 aa18.51■□□□□ 0.55
CDR2-207ENST00000569045 FAM184AQ8NB25 1140 aa18.51■□□□□ 0.55
CDR2-207ENST00000569045 CNNM3Q8NE01 707 aa18.51■□□□□ 0.55
CDR2-207ENST00000569045 HSD17B14Q9BPX1 270 aa18.51■□□□□ 0.55
CDR2-207ENST00000569045 KANSL3Q9P2N6 904 aa18.51■□□□□ 0.55
CDR2-207ENST00000569045 STK39Q9UEW8 545 aa18.51■□□□□ 0.55
CDR2-207ENST00000569045 CNTNAP2Q9UHC6 1331 aa18.5■□□□□ 0.55
CDR2-207ENST00000569045 FAM86C2PA6NEL3 165 aa18.5■□□□□ 0.55
CDR2-207ENST00000569045 GLP2RO95838 553 aa18.5■□□□□ 0.55
CDR2-207ENST00000569045 XRCC6P12956 609 aaKnown RBP eCLIP18.5■□□□□ 0.55
CDR2-207ENST00000569045 AXLP30530 894 aa18.5■□□□□ 0.55
CDR2-207ENST00000569045 MCM7P33993 719 aa18.5■□□□□ 0.55
CDR2-207ENST00000569045 GUCY1B3Q02153 619 aa18.5■□□□□ 0.55
CDR2-207ENST00000569045 ERMNQ8TAM6 284 aa18.5■□□□□ 0.55
CDR2-207ENST00000569045 FAM193BQ96PV7 902 aaPredicted RBP18.5■□□□□ 0.55
CDR2-207ENST00000569045 MTMR9Q96QG7 549 aa18.5■□□□□ 0.55
CDR2-207ENST00000569045 UBN1Q9NPG3 1134 aa18.5■□□□□ 0.55
CDR2-207ENST00000569045 SH2B1Q9NRF2 756 aaPredicted RBP18.5■□□□□ 0.55
CDR2-207ENST00000569045 USP15Q9Y4E8 981 aaPredicted RBP18.5■□□□□ 0.55
CDR2-207ENST00000569045 C5orf42Q9H799 3197 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 PRR33A8MZF0 331 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 NT5C1B-RDH14C9J2C7 533 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 ZBTB39O15060 712 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 HOXB8P17481 243 aaPredicted RBP18.49■□□□□ 0.55
CDR2-207ENST00000569045 TECP42680 631 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 RBM25P49756 843 aaKnown RBP18.49■□□□□ 0.55
CDR2-207ENST00000569045 ORC2Q13416 577 aaPredicted RBP18.49■□□□□ 0.55
CDR2-207ENST00000569045 GIT2Q14161 759 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 LLGL2Q6P1M3 1020 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 NOTUMQ6P988 496 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 TMEM184AQ6ZMB5 413 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 HACE1Q8IYU2 909 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 MRPL43Q8N983 215 aaKnown RBP18.49■□□□□ 0.55
CDR2-207ENST00000569045 CASP10Q92851 521 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 CCDC51Q96ER9 411 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 GBP3Q9H0R5 595 aa18.49■□□□□ 0.55
CDR2-207ENST00000569045 FOXP1Q9H334 677 aaPredicted RBP18.49■□□□□ 0.55
CDR2-207ENST00000569045 RSAD1Q9HA92 442 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms