RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 PGBD4Q96DM1 585 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 APOL5Q9BWW9 433 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 KCNMB3Q9NPA1 279 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 STK36Q9NRP7 1315 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 PPME1Q9Y570 386 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 HCFC2Q9Y5Z7 792 aa15.3■□□□□ 0.04
CNOT1-215ENST00000569020 TECTAO75443 2155 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 TMEM221A6NGB7 291 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 M0R296 226 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 TBX3O15119 743 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 POLGP54098 1239 aaPredicted RBP15.29■□□□□ 0.04
CNOT1-215ENST00000569020 NHLH1Q02575 133 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 RNASELQ05823 741 aaKnown RBP15.29■□□□□ 0.04
CNOT1-215ENST00000569020 ITIH3Q06033 890 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 SIGLEC14Q08ET2 396 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 GIT2Q14161 759 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 LONRF3Q496Y0 759 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 CES5AQ6NT32 575 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 GLB1LQ6UWU2 654 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 PIK3AP1Q6ZUJ8 805 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 SUGP1Q8IWZ8 645 aaKnown RBP15.29■□□□□ 0.04
CNOT1-215ENST00000569020 TMEM87AQ8NBN3 555 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 LPPQ93052 612 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 CEP170P1Q96L14 293 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 VAV3Q9UKW4 847 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 COL4A3BPQ9Y5P4 624 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 KMT2EQ8IZD2 1858 aa15.29■□□□□ 0.04
CNOT1-215ENST00000569020 CLASP2O75122 1294 aaKnown RBP15.28■□□□□ 0.04
CNOT1-215ENST00000569020 ZNF623O75123 536 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 CXCL14O95715 111 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 RFC5P40937 340 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 NPEPPSP55786 919 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 EPHA7Q15375 998 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 NOMO2Q5JPE7 1267 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 OTUD6AQ7L8S5 288 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 SRGAP1Q7Z6B7 1085 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 ZBTB33Q86T24 672 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 C4orf19Q8IY42 314 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 VPS52Q8N1B4 723 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 TCP11Q8WWU5 503 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 WASF1Q92558 559 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 NECTIN4Q96NY8 510 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 NRDE2Q9H7Z3 1164 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 IFT122Q9HBG6 1241 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 TBC1D13Q9NVG8 400 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 INPP5FQ9Y2H2 1132 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 NR2E1Q9Y466 385 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 ZNF318Q5VUA4 2279 aa15.28■□□□□ 0.04
CNOT1-215ENST00000569020 TDRD15B5MCY1 1934 aaKnown RBP15.27■□□□□ 0.04
CNOT1-215ENST00000569020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.04
CNOT1-215ENST00000569020 GAS2O43903 313 aaKnown RBP15.27■□□□□ 0.04
CNOT1-215ENST00000569020 PFKFB2O60825 505 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 OFD1O75665 1012 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 BAG4O95429 457 aaKnown RBP15.27■□□□□ 0.04
CNOT1-215ENST00000569020 ANKRD1Q15327 319 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 PTPN21Q16825 1174 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 NCAPH2Q6IBW4 605 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 DDX53Q86TM3 631 aaKnown RBP15.27■□□□□ 0.04
CNOT1-215ENST00000569020 SLFN12Q8IYM2 578 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 URGCPQ8TCY9 931 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 PSPC1Q8WXF1 523 aaKnown RBP15.27■□□□□ 0.04
CNOT1-215ENST00000569020 IGSF21Q96ID5 467 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 PRRX2Q99811 253 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 LXNQ9BS40 222 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 ZBP1Q9H171 429 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 ADAM7Q9H2U9 754 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 DHX33Q9H6R0 707 aaKnown RBP15.27■□□□□ 0.04
CNOT1-215ENST00000569020 AGPAT5Q9NUQ2 364 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 IRAK3Q9Y616 596 aa15.27■□□□□ 0.04
CNOT1-215ENST00000569020 ASAP2O43150 1006 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 GALTP07902 379 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 SRGAP2CP0DJJ0 459 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 CTSAP10619 480 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 SP100P23497 879 aaPredicted RBP15.26■□□□□ 0.03
CNOT1-215ENST00000569020 YWHABP31946 246 aaKnown RBP15.26■□□□□ 0.03
CNOT1-215ENST00000569020 MRE11P49959 708 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 XKR9Q5GH70 373 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 FBXL6Q8N531 539 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
CNOT1-215ENST00000569020 OXER1Q8TDS5 423 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 PRPF31Q8WWY3 499 aaKnown RBP15.26■□□□□ 0.03
CNOT1-215ENST00000569020 HAS1Q92839 578 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 TMEM143Q96AN5 459 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 RIPOR3Q96MK2 946 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 GBP3Q9H0R5 595 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 BRMS1Q9HCU9 246 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 TSHZ2Q9NRE2 1034 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 BMP2KQ9NSY1 1161 aaPredicted RBP15.26■□□□□ 0.03
CNOT1-215ENST00000569020 GJB4Q9NTQ9 266 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 WRAP73Q9P2S5 460 aaPredicted RBP15.26■□□□□ 0.03
CNOT1-215ENST00000569020 ORC3Q9UBD5 711 aaPredicted RBP15.26■□□□□ 0.03
CNOT1-215ENST00000569020 STK39Q9UEW8 545 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 TPCN1Q9ULQ1 816 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 PCDHB2Q9Y5E7 798 aa15.26■□□□□ 0.03
CNOT1-215ENST00000569020 MUC6Q6W4X9 2439 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 CNTNAP2Q9UHC6 1331 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 MEIS3P2A8K0S8 358 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 ERLIN2O94905 339 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 KRT2P35908 639 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 MTHFRP42898 656 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms