RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 RPL21P46778 160 aaKnown RBP11.68□□□□□ -0.54
PALB2-206ENST00000568219 MRPS35P82673 323 aaKnown RBP11.68□□□□□ -0.54
PALB2-206ENST00000568219 DEUP1Q05D60 604 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 FUT2Q10981 343 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 TCP10Q12799 353 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 MAP7Q14244 749 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 DDX27Q96GQ7 796 aaKnown RBP11.68□□□□□ -0.54
PALB2-206ENST00000568219 PWWP2AQ96N64 755 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 VCX3BQ9H321 246 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 SMYD3Q9H7B4 428 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 SYNCQ9H7C4 482 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 VCX3AQ9NNX9 186 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 RABGAP1Q9Y3P9 1069 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 DPPA5A6NC42 116 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 DCTN3O75935 186 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 PON1P27169 355 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 TNFRSF8P28908 595 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 NMT1P30419 496 aaKnown RBP11.68□□□□□ -0.54
PALB2-206ENST00000568219 DHX34Q14147 1143 aaKnown RBP11.68□□□□□ -0.54
PALB2-206ENST00000568219 GRM4Q14833 912 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 TMEM132AQ24JP5 1023 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 C2CD6Q53TS8 623 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 PALM2Q8IXS6 379 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 ARHGAP24Q8N264 748 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 FAM84BQ96KN1 310 aaPredicted RBP11.68□□□□□ -0.54
PALB2-206ENST00000568219 SH2D3AQ9BRG2 576 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 RHBDL2Q9NX52 303 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 BTG4Q9NY30 223 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 SYNGAP1Q96PV0 1343 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 IFT172Q9UG01 1749 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 ARHGEF35A5YM69 484 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 CAPN9O14815 690 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 CREB3O43889 395 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 DYNLT1P63172 113 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 DPH6Q7L8W6 267 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 LRP10Q7Z4F1 713 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 SPIRE2Q8WWL2 714 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 KIFAP3Q92845 792 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 CELF1Q92879 486 aaKnown RBP11.68□□□□□ -0.54
PALB2-206ENST00000568219 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
PALB2-206ENST00000568219 CDC42EP4Q9H3Q1 356 aaKnown RBP11.68□□□□□ -0.54
PALB2-206ENST00000568219 TYW1Q9NV66 732 aaKnown RBP11.68□□□□□ -0.54
PALB2-206ENST00000568219 ANKRD26Q9UPS8 1709 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 PIAS1O75925 651 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 BTDP43251 543 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 CDK8P49336 464 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 ZC2HC1CQ53FD0 456 aaPredicted RBP11.67□□□□□ -0.54
PALB2-206ENST00000568219 PARP10Q53GL7 1025 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 EGFL6Q8IUX8 553 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 SYT2Q8N9I0 419 aaPredicted RBP11.67□□□□□ -0.54
PALB2-206ENST00000568219 MTFR1LQ9H019 292 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 BLOC1S4Q9NUP1 217 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 AGTPBP1Q9UPW5 1226 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 HOXA13P31271 388 aaPredicted RBP11.67□□□□□ -0.54
PALB2-206ENST00000568219 SOX5P35711 763 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 GPC5P78333 572 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 PSMD6Q15008 389 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 CLUL1Q15846 466 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 SYCP2LQ5T4T6 812 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 RNF220Q5VTB9 566 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 CEP70Q8NHQ1 597 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 B4GALNT2Q8NHY0 566 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 PIP4K2CQ8TBX8 421 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 ZNF512BQ96KM6 892 aaPredicted RBP11.67□□□□□ -0.54
PALB2-206ENST00000568219 ARHGEF10LQ9HCE6 1279 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
PALB2-206ENST00000568219 ANAPC7Q9UJX3 599 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 SUGT1Q9Y2Z0 365 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 CYTH3O43739 400 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 TRPA1O75762 1119 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 HARSP12081 509 aaKnown RBP11.67□□□□□ -0.54
PALB2-206ENST00000568219 KLRK1P26718 216 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 KDSRQ06136 332 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 TRAF1Q13077 416 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 CRELD2Q6UXH1 353 aaPredicted RBP11.67□□□□□ -0.54
PALB2-206ENST00000568219 SLC30A10Q6XR72 485 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 NT5DC3Q86UY8 548 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 KRT35Q92764 455 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 TNFRSF25Q93038 417 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 NSUN4Q96CB9 384 aaKnown RBP11.67□□□□□ -0.54
PALB2-206ENST00000568219 CCDC124Q96CT7 223 aaKnown RBP11.67□□□□□ -0.54
PALB2-206ENST00000568219 RIOK1Q9BRS2 568 aaKnown RBP11.67□□□□□ -0.54
PALB2-206ENST00000568219 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 RGL1Q9NZL6 768 aa11.67□□□□□ -0.54
PALB2-206ENST00000568219 MST1RQ04912 1400 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 RSPH10B2B2RC85 870 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 DDX3XO00571 662 aaKnown RBP eCLIP11.66□□□□□ -0.542e-9■■■□□ 16.8
PALB2-206ENST00000568219 PHF2O75151 1096 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 RSPH10BP0C881 870 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 HNRNPH3P31942 346 aaKnown RBP11.66□□□□□ -0.54
PALB2-206ENST00000568219 PDE1CQ14123 709 aaPredicted RBP11.66□□□□□ -0.54
PALB2-206ENST00000568219 NPY5RQ15761 445 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 CNGA2Q16280 664 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 EPC2Q52LR7 807 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 TTBK2Q6IQ55 1244 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 COL23A1Q86Y22 540 aaPredicted RBP11.66□□□□□ -0.54
PALB2-206ENST00000568219 FITM2Q8N6M3 262 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms