RNA–Protein interactions for RNA: ENST00000567934.5

CDH11-213, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-213ENST00000567934 LONRF3Q496Y0 759 aa17.36■□□□□ 0.37
CDH11-213ENST00000567934 CRIPAKQ8N1N5 446 aa17.36■□□□□ 0.37
CDH11-213ENST00000567934 DEPTORQ8TB45 409 aa17.36■□□□□ 0.37
CDH11-213ENST00000567934 PNMA5Q96PV4 448 aa17.36■□□□□ 0.37
CDH11-213ENST00000567934 MRPL42Q9Y6G3 142 aaKnown RBP17.36■□□□□ 0.37
CDH11-213ENST00000567934 PRRC2BQ5JSZ5 2229 aaKnown RBP17.36■□□□□ 0.37
CDH11-213ENST00000567934 LIG1P18858 919 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 AXLP30530 894 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 BMPR1AP36894 532 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 GRIN1Q05586 938 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 BECN1Q14457 450 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 STK38Q15208 465 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 PTPAQ15257 358 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 PCBP1Q15365 356 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDH11-213ENST00000567934 FOXD4L6Q3SYB3 417 aaPredicted RBP17.35■□□□□ 0.37
CDH11-213ENST00000567934 HYIQ5T013 277 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 FOXD4L3Q6VB84 417 aaPredicted RBP17.35■□□□□ 0.37
CDH11-213ENST00000567934 KCNK18Q7Z418 384 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 KCTD17Q8N5Z5 321 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 KIFAP3Q92845 792 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 USP28Q96RU2 1077 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 C2orf40Q9H1Z8 148 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 RC3H2Q9HBD1 1191 aaKnown RBP17.35■□□□□ 0.37
CDH11-213ENST00000567934 FAM105AQ9NUU6 356 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 COL4A6Q14031 1691 aa17.35■□□□□ 0.37
CDH11-213ENST00000567934 SLC26A4O43511 780 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 RB1P06400 928 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 ZSCAN22P10073 491 aaPredicted RBP17.34■□□□□ 0.37
CDH11-213ENST00000567934 TXLNAP40222 546 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 NAMPTP43490 491 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 RAB27AP51159 221 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 MBTD1Q05BQ5 628 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 DHX8Q14562 1220 aaKnown RBP17.34■□□□□ 0.37
CDH11-213ENST00000567934 SKIV2LQ15477 1246 aaKnown RBP17.34■□□□□ 0.37
CDH11-213ENST00000567934 PTPROQ16827 1216 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 SPECC1Q5M775 1068 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 RINT1Q6NUQ1 792 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 NOTUMQ6P988 496 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 IFNLR1Q8IU57 520 aaPredicted RBP17.34■□□□□ 0.37
CDH11-213ENST00000567934 PGBD4Q96DM1 585 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 CPB2Q96IY4 423 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 NFKBIZQ9BYH8 718 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 TMEM117Q9H0C3 514 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 CSRNP2Q9H175 543 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 AAASQ9NRG9 546 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 TFIP11Q9UBB9 837 aaKnown RBP17.34■□□□□ 0.37
CDH11-213ENST00000567934 MTCH2Q9Y6C9 303 aa17.34■□□□□ 0.37
CDH11-213ENST00000567934 CCDC169A6NNP5 214 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 H3BNC9 293 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 TSPAN1O60635 241 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 HIP1RO75146 1068 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 F13A1P00488 732 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 PLA2G4BP0C869 781 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 RAD51AP2Q09MP3 1159 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 SLC17A8Q8NDX2 589 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 HELQQ8TDG4 1101 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 BSNDQ8WZ55 320 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 CLP1Q92989 425 aaKnown RBP17.33■□□□□ 0.36
CDH11-213ENST00000567934 LPPQ93052 612 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 DRC1Q96MC2 740 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 C11orf84Q9BUA3 381 aaPredicted RBP17.33■□□□□ 0.36
CDH11-213ENST00000567934 RUSC1Q9BVN2 902 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 TRIM6Q9C030 488 aaPredicted RBP17.33■□□□□ 0.36
CDH11-213ENST00000567934 TYW1Q9NV66 732 aaKnown RBP17.33■□□□□ 0.36
CDH11-213ENST00000567934 PRMT7Q9NVM4 692 aaPredicted RBP17.33■□□□□ 0.36
CDH11-213ENST00000567934 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.36
CDH11-213ENST00000567934 CCDC39Q9UFE4 941 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 PCDHB2Q9Y5E7 798 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 PCDHB12Q9Y5F1 795 aa17.33■□□□□ 0.36
CDH11-213ENST00000567934 SRPRBQ9Y5M8 271 aaKnown RBP17.33■□□□□ 0.36
CDH11-213ENST00000567934 LPXNO60711 386 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 PEX3P56589 373 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 SLC39A14Q15043 492 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 KARSQ15046 597 aaKnown RBP17.32■□□□□ 0.36
CDH11-213ENST00000567934 MAPK6Q16659 721 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 TMEM119Q4V9L6 283 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 C1orf186Q6ZWK4 172 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 SYT2Q8N9I0 419 aaPredicted RBP17.32■□□□□ 0.36
CDH11-213ENST00000567934 KRI1Q8N9T8 703 aaKnown RBP17.32■□□□□ 0.36
CDH11-213ENST00000567934 CLIC6Q96NY7 704 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 CASD1Q96PB1 797 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 TRAIPQ9BWF2 469 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 PLVAPQ9BX97 442 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 LMCD1Q9NZU5 365 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 FBXO2Q9UK22 296 aaPredicted RBP17.32■□□□□ 0.36
CDH11-213ENST00000567934 INPP5FQ9Y2H2 1132 aa17.32■□□□□ 0.36
CDH11-213ENST00000567934 CDH23Q9H251 3354 aa17.31■□□□□ 0.36
CDH11-213ENST00000567934 TDRD15B5MCY1 1934 aaKnown RBP17.31■□□□□ 0.36
CDH11-213ENST00000567934 PLXNA4Q9HCM2 1894 aa17.31■□□□□ 0.36
CDH11-213ENST00000567934 ZNF623O75123 536 aa17.31■□□□□ 0.36
CDH11-213ENST00000567934 CSPG5O95196 566 aa17.31■□□□□ 0.36
CDH11-213ENST00000567934 PRKCBP05771 671 aa17.31■□□□□ 0.36
CDH11-213ENST00000567934 KRT18P05783 430 aaKnown RBP17.31■□□□□ 0.36
CDH11-213ENST00000567934 ATF7P17544 494 aaPredicted RBP17.31■□□□□ 0.36
CDH11-213ENST00000567934 ARF4P18085 180 aaPredicted RBP17.31■□□□□ 0.36
CDH11-213ENST00000567934 PLCG1P19174 1290 aa17.31■□□□□ 0.36
CDH11-213ENST00000567934 POU3F3P20264 500 aaPredicted RBP17.31■□□□□ 0.36
CDH11-213ENST00000567934 HOXA11P31270 313 aaPredicted RBP17.31■□□□□ 0.36
CDH11-213ENST00000567934 DMP1Q13316 513 aaPredicted RBP17.31■□□□□ 0.36
CDH11-213ENST00000567934 CLLU1OSQ5K130 101 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms