RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 STK17AQ9UEE5 414 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
RNF40-211ENST00000567365 ATP6V1DQ9Y5K8 247 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 MYH11P35749 1972 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 FAM237AA0A1B0GTK4 181 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 LCHNA4D1U4 455 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 HIP1RO75146 1068 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 EDN1P05305 212 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 LINC00271P0C7V0 271 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 ATF7P17544 494 aaPredicted RBP13.74□□□□□ -0.21
RNF40-211ENST00000567365 NAMPTP43490 491 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 SARSP49591 514 aaKnown RBP13.74□□□□□ -0.21
RNF40-211ENST00000567365 ZNF131P52739 623 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 TFDP1Q14186 410 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 MCM6Q14566 821 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 FAM187BQ17R55 369 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 PPP4R3CPQ6ZMV5 832 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 SLC24A5Q71RS6 500 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 ZNF598Q86UK7 904 aaKnown RBP13.74□□□□□ -0.21
RNF40-211ENST00000567365 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.74□□□□□ -0.21
RNF40-211ENST00000567365 SCLT1Q96NL6 688 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 RAD9AQ99638 391 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 C17orf75Q9HAS0 396 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 C1orf112Q9NSG2 853 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 RNF19AQ9NV58 838 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 ARHGAP28Q9P2N2 729 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 REV3LO60673 3130 aa13.74□□□□□ -0.21
RNF40-211ENST00000567365 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
RNF40-211ENST00000567365 NPHP3-ACAD11A0A0J9YXS1 232 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 A0A0U1RQF3 1178 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 TSPAN1O60635 241 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 ZNF623O75123 536 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 DGKIO75912 1065 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 ANP32AP39687 249 aaKnown RBP13.73□□□□□ -0.21
RNF40-211ENST00000567365 NPTX2P47972 431 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 TAP1Q03518 808 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 UBXN11Q5T124 520 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 RRAGBQ5VZM2 374 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 ADALQ6DHV7 355 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 CCDC73Q6ZRK6 1079 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 CATSPER4Q7RTX7 472 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 GPBP1Q86WP2 473 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 NPAS4Q8IUM7 802 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 SPIRE2Q8WWL2 714 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 TIFAQ96CG3 184 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 DRC1Q96MC2 740 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 FIZ1Q96SL8 496 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 REEP2Q9BRK0 252 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 ELAC1Q9H777 363 aaKnown RBP13.73□□□□□ -0.21
RNF40-211ENST00000567365 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 ODF2LQ9ULJ1 636 aa13.73□□□□□ -0.21
RNF40-211ENST00000567365 MYO9BQ13459 2157 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 LRRIQ4A6NIV6 560 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 TTLL13PA6NNM8 815 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 SFI1A8K8P3 1242 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 TLL1O43897 1013 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 CA3P07451 260 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 TXLNAP40222 546 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 ME1P48163 572 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 GIT2Q14161 759 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 PPP2R5AQ15172 486 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 TAS1R3Q7RTX0 852 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 ECHDC2Q86YB7 292 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 DNAJC19Q96DA6 116 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 PRIMPOLQ96LW4 560 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 CDX2Q99626 313 aaPredicted RBP13.72□□□□□ -0.21
RNF40-211ENST00000567365 KIFC3Q9BVG8 833 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 SCAND2PQ9GZW5 306 aaPredicted RBP13.72□□□□□ -0.21
RNF40-211ENST00000567365 C2orf40Q9H1Z8 148 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 NKX2-4Q9H2Z4 354 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 SEMA6BQ9H3T3 888 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 KBTBD4Q9NVX7 518 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 TMEM161AQ9NX61 479 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 MSRAQ9UJ68 235 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 HPSEQ9Y251 543 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 INSL6Q9Y581 213 aa13.72□□□□□ -0.21
RNF40-211ENST00000567365 A0A1B0GUA9 196 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 FRMD3A2A2Y4 597 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 DENND3A2RUS2 1198 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 LINC01553A4QN01 128 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 MYMKA6NI61 221 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 INO80B-WBP1J3KQ70 363 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 B4GALT5O43286 388 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 UPP2O95045 317 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 SSBP05455 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
RNF40-211ENST00000567365 PLS3P13797 630 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 ZSCAN20P17040 1043 aaPredicted RBP13.71□□□□□ -0.21
RNF40-211ENST00000567365 ARF4P18085 180 aaPredicted RBP13.71□□□□□ -0.21
RNF40-211ENST00000567365 CMA1P23946 247 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 AXLP30530 894 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 PEX3P56589 373 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 RAD51AP2Q09MP3 1159 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 FAM117BQ6P1L5 589 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 SPRED2Q7Z698 418 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 MRPL10Q7Z7H8 261 aaKnown RBP13.71□□□□□ -0.21
RNF40-211ENST00000567365 CCDC51Q96ER9 411 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 PANK2Q9BZ23 570 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 ZNF576Q9H609 170 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms