RNA–Protein interactions for RNA: ENST00000567269.5

CDH16-206, Transcript of cadherin 16, humanhuman

TSL 2

Gene CDH16, Length 3,539 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-206ENST00000567269 IWS1Q96ST2 819 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 POP1Q99575 1024 aaKnown RBP13.13□□□□□ -0.31
CDH16-206ENST00000567269 LRRIQ4A6NIV6 560 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 ZNF862O60290 1169 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 CNGA1P29973 690 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 SOX5P35711 763 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 SMC1AQ14683 1233 aaKnown RBP13.13□□□□□ -0.31
CDH16-206ENST00000567269 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.13□□□□□ -0.31
CDH16-206ENST00000567269 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
CDH16-206ENST00000567269 TMEM143Q96AN5 459 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 APEX2Q9UBZ4 518 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 AFG3L2Q9Y4W6 797 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 UBE4BO95155 1302 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 LCA5LO95447 670 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 NF2P35240 595 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 FSTL1Q12841 308 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 PRPF4BQ13523 1007 aaKnown RBP13.13□□□□□ -0.31
CDH16-206ENST00000567269 NAB2Q15742 525 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 HSP90B2PQ58FF3 399 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 MIS18BP1Q6P0N0 1132 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 HDXQ7Z353 690 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 DAAM2Q86T65 1068 aa13.13□□□□□ -0.31
CDH16-206ENST00000567269 INPP4AQ96PE3 977 aaPredicted RBP13.13□□□□□ -0.31
CDH16-206ENST00000567269 IRF6O14896 467 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 DKC1O60832 514 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH16-206ENST00000567269 ZRANB2O95218 330 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH16-206ENST00000567269 PPP3CAQ08209 521 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 ALCAMQ13740 583 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 PPP2R5AQ15172 486 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 RPS6KA1Q15418 735 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 CFAP221Q4G0U5 840 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 FAM84AQ96KN4 292 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 RPGRIP1Q96KN7 1286 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 TLR10Q9BXR5 811 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 SPON1Q9HCB6 807 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 ANKEF1Q9NU02 776 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 TBX20Q9UMR3 447 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 ANKRD63C9JTQ0 380 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 F8VZ95 297 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 MARK3P27448 753 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
CDH16-206ENST00000567269 SNRNP35Q16560 246 aaKnown RBP13.12□□□□□ -0.31
CDH16-206ENST00000567269 SPATA4Q8NEY3 305 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH16-206ENST00000567269 CTNNBL1Q8WYA6 563 aaPredicted RBP13.12□□□□□ -0.31
CDH16-206ENST00000567269 STK33Q9BYT3 514 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 SIX2Q9NPC8 291 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 FOXN3O00409 490 aaPredicted RBP13.12□□□□□ -0.31
CDH16-206ENST00000567269 MAFGO15525 162 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 CEP104O60308 925 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 RGS20O76081 388 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 OAS2P29728 719 aaKnown RBP13.12□□□□□ -0.31
CDH16-206ENST00000567269 PLA2G4AP47712 749 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
CDH16-206ENST00000567269 IFI16Q16666 785 aaKnown RBP13.12□□□□□ -0.31
CDH16-206ENST00000567269 LMBRD2Q68DH5 695 aaPredicted RBP13.12□□□□□ -0.31
CDH16-206ENST00000567269 PEX26Q7Z412 305 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 CREG2Q8IUH2 290 aa13.12□□□□□ -0.31
CDH16-206ENST00000567269 POLR3FQ9H1D9 316 aaPredicted RBP13.12□□□□□ -0.31
CDH16-206ENST00000567269 PSME4Q14997 1843 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 TMEM110-MUSTN1A8MSY1 372 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 PJA2O43164 708 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 CHRM1P11229 460 aaPredicted RBP13.11□□□□□ -0.31
CDH16-206ENST00000567269 LIG4P49917 911 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 OAZ1P54368 228 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 MAP9Q49MG5 647 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 PHLDB3Q6NSJ2 640 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 C8orf74Q6P047 294 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 XRRA1Q6P2D8 792 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 KLHL7Q8IXQ5 586 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 SAMD3Q8N6K7 520 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 GLG1Q92896 1179 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 FAM213AQ9BRX8 229 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 LRRC1Q9BTT6 524 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 PDE11AQ9HCR9 933 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 DMAC2Q9NW81 257 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 ANKFY1Q9P2R3 1169 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 MYH11P35749 1972 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 GTPBP10A4D1E9 387 aaKnown RBP13.11□□□□□ -0.31
CDH16-206ENST00000567269 EIF3JO75822 258 aaKnown RBP13.11□□□□□ -0.31
CDH16-206ENST00000567269 PGK2P07205 417 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 KCNA2P16389 499 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 MSANTD4Q8NCY6 345 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 BSNDQ8WZ55 320 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 BORCS6Q96GS4 357 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 TCHPQ9BT92 498 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 FUT8Q9BYC5 575 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 TOPORSQ9NS56 1045 aaPredicted RBP13.11□□□□□ -0.31
CDH16-206ENST00000567269 SNCAIPQ9Y6H5 919 aa13.11□□□□□ -0.31
CDH16-206ENST00000567269 DDX3XO00571 662 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDH16-206ENST00000567269 STRN3Q13033 797 aa13.1□□□□□ -0.31
CDH16-206ENST00000567269 TMEM132AQ24JP5 1023 aa13.1□□□□□ -0.31
CDH16-206ENST00000567269 REPS2Q8NFH8 660 aa13.1□□□□□ -0.31
CDH16-206ENST00000567269 ATP6V0A4Q9HBG4 840 aa13.1□□□□□ -0.31
CDH16-206ENST00000567269 ZNF302Q9NR11 478 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms