RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 TIPINQ9BVW5 301 aa18.09■□□□□ 0.49
SCAMP2-208ENST00000566557 PBX4Q9BYU1 374 aa18.09■□□□□ 0.49
SCAMP2-208ENST00000566557 ZHX3Q9H4I2 956 aa18.09■□□□□ 0.49
SCAMP2-208ENST00000566557 ERVK-5Q9HDB9 667 aa18.09■□□□□ 0.49
SCAMP2-208ENST00000566557 ST3GAL5Q9UNP4 418 aa18.09■□□□□ 0.49
SCAMP2-208ENST00000566557 SLC4A7Q9Y6M7 1214 aa18.09■□□□□ 0.49
SCAMP2-208ENST00000566557 MYH11P35749 1972 aa18.08■□□□□ 0.49
SCAMP2-208ENST00000566557 ABHD14A-ACY1A0A1B0GW23 586 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 INO80B-WBP1J3KQ70 363 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 POLR2DO15514 142 aaKnown RBP18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 EFCAB14O75071 495 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 TBCAO75347 108 aaKnown RBP18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 PFKFB1P16118 471 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 LIG1P18858 919 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 GUCY2CP25092 1073 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 WDR5P61964 334 aaKnown RBP18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 PPP2R5AQ15172 486 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 ADALQ6DHV7 355 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 SV2BQ7L1I2 683 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 CATSPER4Q7RTX7 472 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 ZBTB8OSQ8IWT0 167 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 FSIP1Q8NA03 581 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 DEPTORQ8TB45 409 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 BSNDQ8WZ55 320 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 C1QTNF1Q9BXJ1 281 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 KCND2Q9NZV8 630 aa18.08■□□□□ 0.48
SCAMP2-208ENST00000566557 A0A1B0GVL5 298 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 DENND3A2RUS2 1198 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 CCDC169A6NNP5 214 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 ERLIN2O94905 339 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 FAM13AO94988 1023 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 NAMPTP43490 491 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 PEX3P56589 373 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 DEFB103AP81534 67 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 DMP1Q13316 513 aaPredicted RBP18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 ADGRE1Q14246 886 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 CSPP1Q1MSJ5 1256 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 NAALADL2Q58DX5 795 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 DYMQ7RTS9 669 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 SRGAP1Q7Z6B7 1085 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 MYOCDQ8IZQ8 938 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 IQUBQ8NA54 791 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 MRPS27Q92552 414 aaKnown RBP18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 REEP2Q9BRK0 252 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 FTHL17Q9BXU8 183 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 IFT122Q9HBG6 1241 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 KCNH3Q9ULD8 1083 aa18.07■□□□□ 0.48
SCAMP2-208ENST00000566557 PTPRSQ13332 1948 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 SFI1A8K8P3 1242 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 AMHP03971 560 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 CMA1P23946 247 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 PTENP60484 403 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 MAPK7Q13164 816 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 ARSHQ5FYA8 562 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 FAM117BQ6P1L5 589 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 DAW1Q8N136 415 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 STAMQ92783 540 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 SLC9A7Q96T83 725 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 PYM1Q9BRP8 204 aaKnown RBP18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 KIFC3Q9BVG8 833 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 C2orf40Q9H1Z8 148 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 MINDY3Q9H8M7 445 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 PIN4Q9Y237 131 aaKnown RBP18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 CHD7Q9P2D1 2997 aa18.06■□□□□ 0.48
SCAMP2-208ENST00000566557 ATP2A2P16615 1042 aaKnown RBP18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 ZSCAN20P17040 1043 aaPredicted RBP18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 E2F4Q16254 413 aa18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 TMEM132AQ24JP5 1023 aa18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 RASIP1Q5U651 963 aa18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 TMCO2Q7Z6W1 182 aaPredicted RBP18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 CEP57L1Q8IYX8 460 aa18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 LINC01599Q8WXQ3 324 aa18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 NECAB3Q96P71 396 aaPredicted RBP18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 ADAM2Q99965 735 aa18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 TMX1Q9H3N1 280 aa18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 CUEDC2Q9H467 287 aa18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 KMT5AQ9NQR1 393 aa18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 ODF2LQ9ULJ1 636 aa18.05■□□□□ 0.48
SCAMP2-208ENST00000566557 GBF1Q92538 1859 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 A0A1W2PQ27 194 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 A0A1W2PQ64 194 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 A0A1W2PQD8 194 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 MYMKA6NI61 221 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 MGEA5O60502 916 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 UPP2O95045 317 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 IDEP14735 1019 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 SYKP43405 635 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 MBTD1Q05BQ5 628 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 DDX12PQ92771 950 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 ZBED2Q9BTP6 218 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 TSPYL2Q9H2G4 693 aaPredicted RBP18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 TNMDQ9H2S6 317 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 LARSQ9P2J5 1176 aaKnown RBP18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 SERTAD1Q9UHV2 236 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 MSRAQ9UJ68 235 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 REV3LO60673 3130 aa18.04■□□□□ 0.48
SCAMP2-208ENST00000566557 MYO9BQ13459 2157 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms