RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 UBR3Q6ZT12 1888 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 ARHGEF35A5YM69 484 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 TISP43B9A030 160 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 CYP3A4P08684 503 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 BCRP11274 1271 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 PMS2P54278 862 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 ZYXQ15942 572 aaKnown RBP15.39■□□□□ 0.05
CDH1-209ENST00000566510 JAMLQ86YT9 394 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 IPO4Q8TEX9 1081 aaKnown RBP15.39■□□□□ 0.05
CDH1-209ENST00000566510 EMSYQ7Z589 1322 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 UBAP1LF5GYI3 381 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 K7ENM7 598 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 POLR2MP0CAP2 368 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 NPR1P16066 1061 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 MMP14P50281 582 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 ACTN3Q08043 901 aaPredicted RBP15.39■□□□□ 0.05
CDH1-209ENST00000566510 MESDQ14696 234 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 LLGL1Q15334 1064 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
CDH1-209ENST00000566510 KIAA1755Q5JYT7 1200 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 DENND2CQ68D51 928 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 DUPD1Q68J44 220 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 PODNQ7Z5L7 613 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 CACNA2D3Q8IZS8 1091 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 FBXO25Q8TCJ0 367 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 KRT35Q92764 455 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 CSRNP1Q96S65 589 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 FIZ1Q96SL8 496 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 VCPKMTQ9H867 229 aa15.39■□□□□ 0.05
CDH1-209ENST00000566510 TTC7AQ9ULT0 858 aaPredicted RBP15.39■□□□□ 0.05
CDH1-209ENST00000566510 DIS3Q9Y2L1 958 aaKnown RBP15.39■□□□□ 0.05
CDH1-209ENST00000566510 LTBP1Q14766 1721 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 CTNND1O60716 968 aaKnown RBP15.38■□□□□ 0.05
CDH1-209ENST00000566510 HIP1RO75146 1068 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 PPFIA2O75334 1257 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 ALDH1B1P30837 517 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 GCLMP48507 274 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 MARCKSL1P49006 195 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 SLC15A2Q16348 729 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 GKAP1Q5VSY0 366 aaPredicted RBP15.38■□□□□ 0.05
CDH1-209ENST00000566510 HOOK3Q86VS8 718 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 UBL4BQ8N7F7 174 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 LXNQ9BS40 222 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 IDI2Q9BXS1 227 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 UNC45AQ9H3U1 944 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 SEL1LQ9UBV2 794 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 RASAL2Q9UJF2 1139 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 PTPN22Q9Y2R2 807 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 ATP8B3O60423 1300 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 ATMINO43313 823 aaPredicted RBP15.38■□□□□ 0.05
CDH1-209ENST00000566510 ARP10275 920 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 EIF3BP55884 814 aaKnown RBP15.38■□□□□ 0.05
CDH1-209ENST00000566510 CETN1Q12798 172 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 PPP2R5CQ13362 524 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 RRP1BQ14684 758 aaKnown RBP15.38■□□□□ 0.05
CDH1-209ENST00000566510 PPP2R5AQ15172 486 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 NEK9Q8TD19 979 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 GJD4Q96KN9 370 aaPredicted RBP15.38■□□□□ 0.05
CDH1-209ENST00000566510 SH2D3AQ9BRG2 576 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 CCDC113Q9H0I3 377 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 ZBTB21Q9ULJ3 1066 aa15.38■□□□□ 0.05
CDH1-209ENST00000566510 SRCAPQ6ZRS2 3230 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 SIPA1L1O43166 1804 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 MAPK7Q13164 816 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 SLC29A2Q14542 456 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 PPP2R5EQ16537 467 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 CEP55Q53EZ4 464 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 C6orf89Q6UWU4 347 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 RHOT2Q8IXI1 618 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 RPUSD2Q8IZ73 545 aaKnown RBP15.37■□□□□ 0.05
CDH1-209ENST00000566510 SYT11Q9BT88 431 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 QSER1Q2KHR3 1735 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 FRMPD4Q14CM0 1322 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 SRRM3A6NNA2 597 aaPredicted RBP15.37■□□□□ 0.05
CDH1-209ENST00000566510 PIK3CDO00329 1044 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 SLCO1A2P46721 670 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
CDH1-209ENST00000566510 MEX3CQ5U5Q3 659 aaKnown RBP15.37■□□□□ 0.05
CDH1-209ENST00000566510 CHADLQ6NUI6 762 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 FMNL3Q8IVF7 1028 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 ARHGEF19Q8IW93 802 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 SEPT12Q8IYM1 358 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 SLC5A5Q92911 643 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 ZDHHC18Q9NUE0 388 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 DMAC2Q9NW81 257 aa15.37■□□□□ 0.05
CDH1-209ENST00000566510 LRRC37AA6NMS7 1700 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 VCAM1P19320 739 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 DHX34Q14147 1143 aaKnown RBP15.36■□□□□ 0.05
CDH1-209ENST00000566510 ACER1Q8TDN7 264 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 CEP89Q96ST8 783 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 OSBPL7Q9BZF2 842 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 PABPC3Q9H361 631 aaKnown RBP15.36■□□□□ 0.05
CDH1-209ENST00000566510 ACP6Q9NPH0 428 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 ODF2LQ9ULJ1 636 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 IPO5O00410 1097 aaKnown RBP15.36■□□□□ 0.05
CDH1-209ENST00000566510 RGS16O15492 202 aaPredicted RBP15.36■□□□□ 0.05
CDH1-209ENST00000566510 ECE2O60344 883 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 GPC5P78333 572 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 KIF22Q14807 665 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 NFIL3Q16649 462 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms