RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 INTS4Q96HW7 963 aaKnown RBP21.44■■□□□ 1.02
CCDC113-204ENST00000566498 BHMT2Q9H2M3 363 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 AGPAT5Q9NUQ2 364 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 FAM105AQ9NUU6 356 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 DNM3Q9UQ16 869 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 REV3LO60673 3130 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 VWA3AA6NCI4 1184 aa21.43■■□□□ 1.02
CCDC113-204ENST00000566498 LRRIQ4A6NIV6 560 aa21.43■■□□□ 1.02
CCDC113-204ENST00000566498 CYP11B2P19099 503 aa21.43■■□□□ 1.02
CCDC113-204ENST00000566498 CAPSQ13938 189 aa21.43■■□□□ 1.02
CCDC113-204ENST00000566498 ZNF598Q86UK7 904 aaKnown RBP21.43■■□□□ 1.02
CCDC113-204ENST00000566498 HELQQ8TDG4 1101 aa21.43■■□□□ 1.02
CCDC113-204ENST00000566498 HLA-CQ95604 372 aa21.43■■□□□ 1.02
CCDC113-204ENST00000566498 TRAIPQ9BWF2 469 aa21.43■■□□□ 1.02
CCDC113-204ENST00000566498 LMAN2LQ9H0V9 348 aa21.43■■□□□ 1.02
CCDC113-204ENST00000566498 RNF19AQ9NV58 838 aa21.43■■□□□ 1.02
CCDC113-204ENST00000566498 PCDHB2Q9Y5E7 798 aa21.43■■□□□ 1.02
CCDC113-204ENST00000566498 SYT1P21579 422 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 HOXA11P31270 313 aaPredicted RBP21.42■■□□□ 1.02
CCDC113-204ENST00000566498 RAB27AP51159 221 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 TFF2Q03403 129 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 AAK1Q2M2I8 961 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 TIGD5Q53EQ6 642 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 CLLU1OSQ5K130 101 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 LPPQ93052 612 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 PGBD4Q96DM1 585 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 ASB2Q96Q27 587 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 HCSTQ9UBK5 93 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 COG5Q9UP83 839 aa21.42■■□□□ 1.02
CCDC113-204ENST00000566498 ZNF623O75123 536 aa21.41■■□□□ 1.02
CCDC113-204ENST00000566498 ITGB1P05556 798 aa21.41■■□□□ 1.02
CCDC113-204ENST00000566498 ATF7P17544 494 aaPredicted RBP21.41■■□□□ 1.02
CCDC113-204ENST00000566498 PCBP1Q15365 356 aaKnown RBP eCLIP21.41■■□□□ 1.02
CCDC113-204ENST00000566498 ARL6IP4Q66PJ3 421 aaKnown RBP21.41■■□□□ 1.02
CCDC113-204ENST00000566498 LRRC55Q6ZSA7 311 aa21.41■■□□□ 1.02
CCDC113-204ENST00000566498 THNSL1Q8IYQ7 743 aa21.41■■□□□ 1.02
CCDC113-204ENST00000566498 SPPL3Q8TCT6 385 aa21.41■■□□□ 1.02
CCDC113-204ENST00000566498 NSUN3Q9H649 340 aaKnown RBP21.41■■□□□ 1.02
CCDC113-204ENST00000566498 CWH43Q9H720 699 aa21.41■■□□□ 1.02
CCDC113-204ENST00000566498 POLD4Q9HCU8 107 aa21.41■■□□□ 1.02
CCDC113-204ENST00000566498 E9PMD0 336 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 LAG3P18627 525 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 AXLP30530 894 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 MBTD1Q05BQ5 628 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 TCEAL5Q5H9L2 206 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 TJAP1Q5JTD0 557 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 GLB1LQ6UWU2 654 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 EP400NLQ6ZTU2 488 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 IFNLR1Q8IU57 520 aaPredicted RBP21.4■■□□□ 1.02
CCDC113-204ENST00000566498 ZBTB8OSQ8IWT0 167 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 LRRC43Q8N309 656 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 COLGALT1Q8NBJ5 622 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 MICAL1Q8TDZ2 1067 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 SYMPKQ92797 1274 aaKnown RBP21.4■■□□□ 1.02
CCDC113-204ENST00000566498 SNX21Q969T3 373 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 CPB2Q96IY4 423 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 CDK5RAP3Q96JB5 506 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 NFKBIZQ9BYH8 718 aa21.4■■□□□ 1.02
CCDC113-204ENST00000566498 TSPAN1O60635 241 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 EYA4O95677 639 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 BMP15O95972 392 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 SF3A1Q15459 793 aaKnown RBP21.39■■□□□ 1.01
CCDC113-204ENST00000566498 CSPP1Q1MSJ5 1256 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 NOTUMQ6P988 496 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 HSCBQ8IWL3 235 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 POF1BQ8WVV4 589 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 IFT74Q96LB3 600 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 PLIN2Q99541 437 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 MMTAG2Q9BU76 263 aaKnown RBP21.39■■□□□ 1.01
CCDC113-204ENST00000566498 INPP5FQ9Y2H2 1132 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 KIAA1671Q9BY89 1806 aa21.39■■□□□ 1.01
CCDC113-204ENST00000566498 FGF18O76093 207 aa21.38■■□□□ 1.01
CCDC113-204ENST00000566498 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
CCDC113-204ENST00000566498 DNAJB1P25685 340 aa21.38■■□□□ 1.01
CCDC113-204ENST00000566498 RNASELQ05823 741 aaKnown RBP21.38■■□□□ 1.01
CCDC113-204ENST00000566498 PPP2R5AQ15172 486 aa21.38■■□□□ 1.01
CCDC113-204ENST00000566498 TMEM132AQ24JP5 1023 aa21.38■■□□□ 1.01
CCDC113-204ENST00000566498 KCNT2Q6UVM3 1135 aa21.38■■□□□ 1.01
CCDC113-204ENST00000566498 ZNF558Q96NG5 402 aa21.38■■□□□ 1.01
CCDC113-204ENST00000566498 COL25A1Q9BXS0 654 aaPredicted RBP21.38■■□□□ 1.01
CCDC113-204ENST00000566498 MRPL9Q9BYD2 267 aaKnown RBP21.38■■□□□ 1.01
CCDC113-204ENST00000566498 TRIM6Q9C030 488 aaPredicted RBP21.38■■□□□ 1.01
CCDC113-204ENST00000566498 MEIS3P2A8K0S8 358 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 OFD1O75665 1012 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 SSBP05455 408 aaKnown RBP eCLIP21.37■■□□□ 1.01
CCDC113-204ENST00000566498 LIG1P18858 919 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 UBA7P41226 1012 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 ALDH7A1P49419 539 aaKnown RBP21.37■■□□□ 1.01
CCDC113-204ENST00000566498 KRT17Q04695 432 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 NOMO2Q5JPE7 1267 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 UBXN11Q5T124 520 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 MRPL10Q7Z7H8 261 aaKnown RBP21.37■■□□□ 1.01
CCDC113-204ENST00000566498 CABP7Q86V35 215 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 CNNM3Q8NE01 707 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 DEPTORQ8TB45 409 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 KIFAP3Q92845 792 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 NT5C3AQ9H0P0 336 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 CSRNP2Q9H175 543 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 C2orf40Q9H1Z8 148 aa21.37■■□□□ 1.01
CCDC113-204ENST00000566498 IGFLR1Q9H665 355 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms