RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 CELF4Q9BZC1 486 aaKnown RBP16.31■□□□□ 0.2
SPG7-213ENST00000566221 GCOM2Q9BZD3 368 aaPredicted RBP16.31■□□□□ 0.2
SPG7-213ENST00000566221 ST6GALNAC4Q9H4F1 302 aa16.31■□□□□ 0.2
SPG7-213ENST00000566221 TBC1D7Q9P0N9 293 aa16.31■□□□□ 0.2
SPG7-213ENST00000566221 ARHGAP28Q9P2N2 729 aa16.31■□□□□ 0.2
SPG7-213ENST00000566221 MAN1B1Q9UKM7 699 aa16.31■□□□□ 0.2
SPG7-213ENST00000566221 TBX21Q9UL17 535 aa16.31■□□□□ 0.2
SPG7-213ENST00000566221 CDY2AQ9Y6F7 541 aa16.31■□□□□ 0.2
SPG7-213ENST00000566221 UBE4BO95155 1302 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 A0A087WZ62 844 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 EIF3DO15371 548 aaKnown RBP eCLIP16.3■□□□□ 0.2
SPG7-213ENST00000566221 CRYBB1P53674 252 aaPredicted RBP16.3■□□□□ 0.2
SPG7-213ENST00000566221 PTENP60484 403 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 MORC3Q14149 939 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 ZNF618Q5T7W0 954 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 ZNF658Q5TYW1 1059 aaPredicted RBP16.3■□□□□ 0.2
SPG7-213ENST00000566221 HAUS6Q7Z4H7 955 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 SRGAP1Q7Z6B7 1085 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 TMEM161BQ8NDZ6 487 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 KCNN1Q92952 543 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 HVCN1Q96D96 273 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 ZNF668Q96K58 619 aaPredicted RBP16.3■□□□□ 0.2
SPG7-213ENST00000566221 OSMRQ99650 979 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 FDXACB1Q9BRP7 624 aaPredicted RBP16.3■□□□□ 0.2
SPG7-213ENST00000566221 KIFC3Q9BVG8 833 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 INO80BQ9C086 356 aaPredicted RBP16.3■□□□□ 0.2
SPG7-213ENST00000566221 HIPK3Q9H422 1215 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 IFT122Q9HBG6 1241 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 TMEM39AQ9NV64 488 aa16.3■□□□□ 0.2
SPG7-213ENST00000566221 DENND3A2RUS2 1198 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 BIN1O00499 593 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 PPP1R37O75864 691 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 GCNT3O95395 438 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 DARSP14868 501 aaKnown RBP16.29■□□□□ 0.2
SPG7-213ENST00000566221 SELPP16109 830 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 NMT1P30419 496 aaKnown RBP16.29■□□□□ 0.2
SPG7-213ENST00000566221 LRRC8DQ7L1W4 858 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 ZNF720Q7Z2F6 126 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 KIAA0895Q8NCT3 520 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 TET1Q8NFU7 2136 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 HPS3Q969F9 1004 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 GINS2Q9Y248 185 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 PCDHB13Q9Y5F0 798 aa16.29■□□□□ 0.2
SPG7-213ENST00000566221 MICAL3Q7RTP6 2002 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 KIF20AO95235 890 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 CHRNA1P02708 482 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 MYBP10242 640 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 SFPQP23246 707 aaKnown RBP eCLIP16.28■□□□□ 0.2
SPG7-213ENST00000566221 EIF4BP23588 611 aaKnown RBP16.28■□□□□ 0.2
SPG7-213ENST00000566221 CASP5P51878 434 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 GTF2BQ00403 316 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 MBTD1Q05BQ5 628 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 STRN3Q13033 797 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 STK4Q13043 487 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 PCBP1Q15365 356 aaKnown RBP eCLIP16.28■□□□□ 0.2
SPG7-213ENST00000566221 ZSCAN23Q3MJ62 389 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 SASS6Q6UVJ0 657 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 EPM2AIP1Q7L775 607 aaPredicted RBP16.28■□□□□ 0.2
SPG7-213ENST00000566221 FGFBP2Q9BYJ0 223 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 CCDC113Q9H0I3 377 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 TMEM134Q9H6X4 195 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 GDAQ9Y2T3 454 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 SQORQ9Y6N5 450 aa16.28■□□□□ 0.2
SPG7-213ENST00000566221 INO80B-WBP1J3KQ70 363 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 K7ERI5 159 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 KIAA0355O15063 1070 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 PARNO95453 639 aaKnown RBP16.27■□□□□ 0.2
SPG7-213ENST00000566221 PRKCBP05771 671 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 PPP1R2P41236 205 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 STIM1Q13586 685 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 MAPK6Q16659 721 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 COBLL1Q53SF7 1204 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 FBXO47Q5MNV8 452 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 L1TD1Q5T7N2 865 aaKnown RBP16.27■□□□□ 0.2
SPG7-213ENST00000566221 TRAF7Q6Q0C0 670 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 MAP4K3Q8IVH8 894 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 MYOCDQ8IZQ8 938 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 USP38Q8NB14 1042 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 GLIS3Q8NEA6 775 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 STRA6Q9BX79 667 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 PPP1R12CQ9BZL4 782 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 MINDY3Q9H8M7 445 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 CDHR5Q9HBB8 845 aa16.27■□□□□ 0.2
SPG7-213ENST00000566221 PRDM5Q9NQX1 630 aaPredicted RBP16.27■□□□□ 0.2
SPG7-213ENST00000566221 PRMT7Q9NVM4 692 aaPredicted RBP16.27■□□□□ 0.2
SPG7-213ENST00000566221 CUL9Q8IWT3 2517 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 SYCE3A1L190 88 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 ERLIN2O94905 339 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 NLRP12P59046 1061 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 ZNF445P59923 1031 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 STX1AQ16623 288 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 FAM187BQ17R55 369 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 BMT2Q1RMZ1 405 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 ZC2HC1CQ53FD0 456 aaPredicted RBP16.26■□□□□ 0.19
SPG7-213ENST00000566221 ISM2Q6H9L7 571 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 TSHZ1Q6ZSZ6 1077 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 TAS1R3Q7RTX0 852 aa16.26■□□□□ 0.19
SPG7-213ENST00000566221 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms