RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 ZNF623O75123 536 aa21.09■□□□□ 0.97
ABCA3-204ENST00000566200 ZC3H11AO75152 810 aaKnown RBP eCLIP21.09■□□□□ 0.97
ABCA3-204ENST00000566200 OFD1O75665 1012 aa21.09■□□□□ 0.97
ABCA3-204ENST00000566200 CTDNEP1O95476 244 aa21.09■□□□□ 0.97
ABCA3-204ENST00000566200 SP100P23497 879 aaPredicted RBP21.09■□□□□ 0.97
ABCA3-204ENST00000566200 NEK8Q86SG6 692 aa21.09■□□□□ 0.97
ABCA3-204ENST00000566200 PRSS33Q8NF86 280 aa21.09■□□□□ 0.97
ABCA3-204ENST00000566200 CASP10Q92851 521 aa21.09■□□□□ 0.97
ABCA3-204ENST00000566200 ASIC4Q96FT7 647 aa21.09■□□□□ 0.97
ABCA3-204ENST00000566200 INO80BQ9C086 356 aaPredicted RBP21.09■□□□□ 0.97
ABCA3-204ENST00000566200 DHX33Q9H6R0 707 aaKnown RBP21.09■□□□□ 0.97
ABCA3-204ENST00000566200 AGPAT5Q9NUQ2 364 aa21.09■□□□□ 0.97
ABCA3-204ENST00000566200 TPCN1Q9ULQ1 816 aa21.09■□□□□ 0.97
ABCA3-204ENST00000566200 CCDC194A0A1B0GVG4 234 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 CXCL14O95715 111 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 MRE11P49959 708 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 SIGLEC14Q08ET2 396 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 PTPN21Q16825 1174 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 NOMO2Q5JPE7 1267 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 CATSPER4Q7RTX7 472 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 VPS52Q8N1B4 723 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 FEZF2Q8TBJ5 459 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 TMEM169Q96HH4 297 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 VN1R3Q9BXE9 311 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 POMKQ9H5K3 350 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 MINDY3Q9H8M7 445 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 DNAJB4Q9UDY4 337 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 COL4A3BPQ9Y5P4 624 aa21.08■□□□□ 0.97
ABCA3-204ENST00000566200 FAM205CA6NFA0 338 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 PFKFB2O60825 505 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 P4HBP07237 508 aaKnown RBP21.07■□□□□ 0.96
ABCA3-204ENST00000566200 GALTP07902 379 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 GCFC2P16383 781 aaKnown RBP21.07■□□□□ 0.96
ABCA3-204ENST00000566200 AFF1P51825 1210 aaKnown RBP21.07■□□□□ 0.96
ABCA3-204ENST00000566200 SPIRE1Q08AE8 756 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 KANK3Q6NY19 840 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 GLB1LQ6UWU2 654 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 AGMOQ6ZNB7 445 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 PIK3AP1Q6ZUJ8 805 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 ZNF280BQ86YH2 543 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 POTEDQ86YR6 584 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 PRPF31Q8WWY3 499 aaKnown RBP21.07■□□□□ 0.96
ABCA3-204ENST00000566200 RSPH1Q8WYR4 309 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 TMEM143Q96AN5 459 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 IGSF21Q96ID5 467 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 CEP170P1Q96L14 293 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 JPH2Q9BR39 696 aaPredicted RBP21.07■□□□□ 0.96
ABCA3-204ENST00000566200 ADAM7Q9H2U9 754 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 RGL1Q9NZL6 768 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 INPP5FQ9Y2H2 1132 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 IRAK3Q9Y616 596 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 PIEZO1Q92508 2521 aa21.07■□□□□ 0.96
ABCA3-204ENST00000566200 ZBTB39O15060 712 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 CCNT1O60563 726 aaKnown RBP21.06■□□□□ 0.96
ABCA3-204ENST00000566200 CDKL5O76039 1030 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 CTSAP10619 480 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 SKIP12755 728 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 SLC11A1P49279 550 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 RAB27AP51159 221 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 TPRNQ4KMQ1 711 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 UBXN11Q5T124 520 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 DDX53Q86TM3 631 aaKnown RBP21.06■□□□□ 0.96
ABCA3-204ENST00000566200 C4orf19Q8IY42 314 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 FBXL6Q8N531 539 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 C12orf76Q8N812 135 aaPredicted RBP21.06■□□□□ 0.96
ABCA3-204ENST00000566200 SLC7A3Q8WY07 619 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 PHOX2BQ99453 314 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 LXNQ9BS40 222 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 SLKQ9H2G2 1235 aaPredicted RBP21.06■□□□□ 0.96
ABCA3-204ENST00000566200 BMP2KQ9NSY1 1161 aaPredicted RBP21.06■□□□□ 0.96
ABCA3-204ENST00000566200 PCDHB2Q9Y5E7 798 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 DENND4AQ7Z401 1863 aa21.06■□□□□ 0.96
ABCA3-204ENST00000566200 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.05■□□□□ 0.96
ABCA3-204ENST00000566200 TBX3O15119 743 aa21.05■□□□□ 0.96
ABCA3-204ENST00000566200 DDHD2O94830 711 aa21.05■□□□□ 0.96
ABCA3-204ENST00000566200 WEE2P0C1S8 567 aa21.05■□□□□ 0.96
ABCA3-204ENST00000566200 HOXA11P31270 313 aaPredicted RBP21.05■□□□□ 0.96
ABCA3-204ENST00000566200 CA8P35219 290 aa21.05■□□□□ 0.96
ABCA3-204ENST00000566200 POLGP54098 1239 aaPredicted RBP21.05■□□□□ 0.96
ABCA3-204ENST00000566200 EPHA7Q15375 998 aa21.05■□□□□ 0.96
ABCA3-204ENST00000566200 MRPL10Q7Z7H8 261 aaKnown RBP21.05■□□□□ 0.96
ABCA3-204ENST00000566200 SLC22A17Q8WUG5 538 aa21.05■□□□□ 0.96
ABCA3-204ENST00000566200 C2CD4DB7Z1M9 353 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 SRGAP2CP0DJJ0 459 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 FDPSP14324 419 aaKnown RBP21.04■□□□□ 0.96
ABCA3-204ENST00000566200 EPCAMP16422 314 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 YWHABP31946 246 aaKnown RBP21.04■□□□□ 0.96
ABCA3-204ENST00000566200 RFC5P40937 340 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 VCPP55072 806 aaKnown RBP21.04■□□□□ 0.96
ABCA3-204ENST00000566200 ITIH3Q06033 890 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 LAMTOR4Q0VGL1 99 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 NR5A1Q13285 461 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 PSPC1Q8WXF1 523 aaKnown RBP21.04■□□□□ 0.96
ABCA3-204ENST00000566200 TNFRSF25Q93038 417 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 DYDC2Q96IM9 177 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 GBP3Q9H0R5 595 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 TSHZ2Q9NRE2 1034 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 PPME1Q9Y570 386 aa21.04■□□□□ 0.96
ABCA3-204ENST00000566200 DKC1O60832 514 aaKnown RBP eCLIP21.03■□□□□ 0.96
ABCA3-204ENST00000566200 RNASELQ05823 741 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms