RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 LOC105371045A0A1W2PR82 267 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 GRID2IPA4D2P6 1211 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 SCDO00767 359 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 ANTXR2P58335 489 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 C21orf58P58505 322 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 MRPS21P82921 87 aaKnown RBP4.94□□□□□ -1.62
PALB2-204ENST00000566069 ELAVL1Q15717 326 aaKnown RBP4.94□□□□□ -1.62
PALB2-204ENST00000566069 RNF180Q86T96 592 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 GLCCI1Q86VQ1 547 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 DLG3Q92796 817 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 MNTQ99583 582 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 SYNPO2LQ9H987 977 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 B4GALT6Q9UBX8 382 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 MAGEL2Q9UJ55 1249 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.94□□□□□ -1.62
PALB2-204ENST00000566069 ASB1Q9Y576 335 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 HS3ST4Q9Y661 456 aa4.94□□□□□ -1.62
PALB2-204ENST00000566069 UBE2QL1A1L167 161 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 MASP2O00187 686 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 HIP1RO75146 1068 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 RHOBTB3O94955 611 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 VIL1P09327 827 aaKnown RBP4.93□□□□□ -1.62
PALB2-204ENST00000566069 APEX1P27695 318 aaKnown RBP4.93□□□□□ -1.62
PALB2-204ENST00000566069 SOX5P35711 763 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 IRF9Q00978 393 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 PCBP1Q15365 356 aaKnown RBP eCLIP4.93□□□□□ -1.62
PALB2-204ENST00000566069 RNF187Q5TA31 235 aaPredicted RBP4.93□□□□□ -1.62
PALB2-204ENST00000566069 KLHDC10Q6PID8 442 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 KRT26Q7Z3Y9 468 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 FAM177A1Q8N128 213 aaPredicted RBP4.93□□□□□ -1.62
PALB2-204ENST00000566069 ZNF276Q8N554 614 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 ANKRD53Q8N9V6 530 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 CHAC2Q8WUX2 184 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 LPPQ93052 612 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 RIOX1Q9H6W3 641 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 CAAP1Q9H8G2 361 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 PTGFRNQ9P2B2 879 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 FZD1Q9UP38 647 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 RBM8AQ9Y5S9 174 aaKnown RBP4.93□□□□□ -1.62
PALB2-204ENST00000566069 B3GALT1Q9Y5Z6 326 aa4.93□□□□□ -1.62
PALB2-204ENST00000566069 PTPDC1A2A3K4 754 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 FOXP2O15409 715 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 GAS7O60861 476 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 ZBTB48P10074 688 aaPredicted RBP4.92□□□□□ -1.62
PALB2-204ENST00000566069 ZFP36P26651 326 aaKnown RBP4.92□□□□□ -1.62
PALB2-204ENST00000566069 BPIFB4P59827 614 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 DSG1Q02413 1049 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 SEPT7Q16181 437 aaKnown RBP4.92□□□□□ -1.62
PALB2-204ENST00000566069 CATSPEREQ5SY80 951 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 ELOA2Q8IYF1 753 aaPredicted RBP4.92□□□□□ -1.62
PALB2-204ENST00000566069 HIPK4Q8NE63 616 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 OR2W6PQ8NHA6 318 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 FOXRED1Q96CU9 486 aaPredicted RBP4.92□□□□□ -1.62
PALB2-204ENST00000566069 SLC7A6OSQ96CW6 309 aaPredicted RBP4.92□□□□□ -1.62
PALB2-204ENST00000566069 SPC25Q9HBM1 224 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 KCNH7Q9NS40 1196 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 ZNHIT2Q9UHR6 403 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 ZKSCAN5Q9Y2L8 839 aa4.92□□□□□ -1.62
PALB2-204ENST00000566069 DNAJC6O75061 913 aa4.91□□□□□ -1.62
PALB2-204ENST00000566069 F2P00734 622 aa4.91□□□□□ -1.62
PALB2-204ENST00000566069 SDHAP31040 664 aa4.91□□□□□ -1.62
PALB2-204ENST00000566069 PTTG1IPP53801 180 aa4.91□□□□□ -1.62
PALB2-204ENST00000566069 SMAD3P84022 425 aaKnown RBP4.91□□□□□ -1.62
PALB2-204ENST00000566069 DHCR24Q15392 516 aa4.91□□□□□ -1.62
PALB2-204ENST00000566069 ZKSCAN2Q63HK3 967 aa4.91□□□□□ -1.62
PALB2-204ENST00000566069 OLFML1Q6UWY5 402 aa4.91□□□□□ -1.62
PALB2-204ENST00000566069 RTN4RL1Q86UN2 441 aaPredicted RBP4.91□□□□□ -1.62
PALB2-204ENST00000566069 LEO1Q8WVC0 666 aaPredicted RBP4.91□□□□□ -1.62
PALB2-204ENST00000566069 NKD2Q969F2 451 aaPredicted RBP4.91□□□□□ -1.62
PALB2-204ENST00000566069 PGBD4Q96DM1 585 aa4.91□□□□□ -1.62
PALB2-204ENST00000566069 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.91□□□□□ -1.62
PALB2-204ENST00000566069 ARHGEF17Q96PE2 2063 aaPredicted RBP4.91□□□□□ -1.62
PALB2-204ENST00000566069 ZAR1LA6NP61 321 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 ZNF891A8MT65 544 aaPredicted RBP4.9□□□□□ -1.63
PALB2-204ENST00000566069 H7C1D1 291 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 H2AFYO75367 372 aaKnown RBP4.9□□□□□ -1.63
PALB2-204ENST00000566069 KRT37O76014 449 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 ITGB1P05556 798 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 ZNF37AP17032 561 aaPredicted RBP4.9□□□□□ -1.63
PALB2-204ENST00000566069 CLK3P49761 638 aaKnown RBP4.9□□□□□ -1.63
PALB2-204ENST00000566069 SCNN1BP51168 640 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 KRTAP10-9P60411 292 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 CT47A1Q5JQC4 288 aaPredicted RBP4.9□□□□□ -1.63
PALB2-204ENST00000566069 FKBP15Q5T1M5 1219 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 CREB3L3Q68CJ9 461 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 CC2D1AQ6P1N0 951 aaPredicted RBP4.9□□□□□ -1.63
PALB2-204ENST00000566069 PROKR1Q8TCW9 393 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 CALML6Q8TD86 181 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 TCF25Q9BQ70 676 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 IL23AQ9NPF7 189 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 DENND2AQ9ULE3 1009 aa4.9□□□□□ -1.63
PALB2-204ENST00000566069 DVL2O14641 736 aa4.89□□□□□ -1.63
PALB2-204ENST00000566069 ATP2A2P16615 1042 aaKnown RBP4.89□□□□□ -1.63
PALB2-204ENST00000566069 CNGA1P29973 690 aa4.89□□□□□ -1.63
PALB2-204ENST00000566069 FNTBP49356 437 aa4.89□□□□□ -1.63
PALB2-204ENST00000566069 KIF11P52732 1056 aa4.89□□□□□ -1.63
PALB2-204ENST00000566069 SESN2P58004 480 aaPredicted RBP4.89□□□□□ -1.63
PALB2-204ENST00000566069 OCRLQ01968 901 aa4.89□□□□□ -1.63
PALB2-204ENST00000566069 ALDH6A1Q02252 535 aaKnown RBP4.89□□□□□ -1.63
PALB2-204ENST00000566069 TCIRG1Q13488 830 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms