RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 PGBD4Q96DM1 585 aa22.03■■□□□ 1.12
CMTM3-211ENST00000565922 NT5C3AQ9H0P0 336 aa22.03■■□□□ 1.12
CMTM3-211ENST00000565922 FAM105AQ9NUU6 356 aa22.03■■□□□ 1.12
CMTM3-211ENST00000565922 COG5Q9UP83 839 aa22.03■■□□□ 1.12
CMTM3-211ENST00000565922 DNM3Q9UQ16 869 aa22.03■■□□□ 1.12
CMTM3-211ENST00000565922 PRUNE2Q8WUY3 3088 aa22.03■■□□□ 1.12
CMTM3-211ENST00000565922 A0A087WWV3 80 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 INO80B-WBP1J3KQ70 363 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 ZNF623O75123 536 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 LAG3P18627 525 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 CYP11B2P19099 503 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 GLRA2P23416 452 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 PPP2R5AQ15172 486 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 AAK1Q2M2I8 961 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 ZBTB8OSQ8IWT0 167 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 CCDC51Q96ER9 411 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 AK8Q96MA6 479 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 BHMT2Q9H2M3 363 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 MINDY3Q9H8M7 445 aa22.02■■□□□ 1.12
CMTM3-211ENST00000565922 CARNS1A5YM72 827 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 VWA3AA6NCI4 1184 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 LRRIQ4A6NIV6 560 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 SYT1P21579 422 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 IL17AQ16552 155 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 NOTUMQ6P988 496 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 MAEAQ7L5Y9 396 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 CNNM3Q8NE01 707 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 CDK5RAP3Q96JB5 506 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 CASD1Q96PB1 797 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 C2orf40Q9H1Z8 148 aa22.01■■□□□ 1.11
CMTM3-211ENST00000565922 NSUN3Q9H649 340 aaKnown RBP22.01■■□□□ 1.11
CMTM3-211ENST00000565922 UNC80Q8N2C7 3258 aa22■■□□□ 1.11
CMTM3-211ENST00000565922 SLC26A4O43511 780 aa22■■□□□ 1.11
CMTM3-211ENST00000565922 EYA4O95677 639 aa22■■□□□ 1.11
CMTM3-211ENST00000565922 ATF7P17544 494 aaPredicted RBP22■■□□□ 1.11
CMTM3-211ENST00000565922 ECM1Q16610 540 aa22■■□□□ 1.11
CMTM3-211ENST00000565922 SYMPKQ92797 1274 aaKnown RBP22■■□□□ 1.11
CMTM3-211ENST00000565922 KIFAP3Q92845 792 aa22■■□□□ 1.11
CMTM3-211ENST00000565922 GPRC5CQ9NQ84 441 aa22■■□□□ 1.11
CMTM3-211ENST00000565922 RNF19AQ9NV58 838 aa22■■□□□ 1.11
CMTM3-211ENST00000565922 TYW1Q9NV66 732 aaKnown RBP22■■□□□ 1.11
CMTM3-211ENST00000565922 PLAGL2Q9UPG8 496 aa22■■□□□ 1.11
CMTM3-211ENST00000565922 TDRD15B5MCY1 1934 aaKnown RBP22■■□□□ 1.11
CMTM3-211ENST00000565922 PP2D1A8MPX8 630 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 GRM6O15303 877 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 TSPAN1O60635 241 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 HSP90AA1P07900 732 aaKnown RBP21.99■■□□□ 1.11
CMTM3-211ENST00000565922 PDIA4P13667 645 aaKnown RBP21.99■■□□□ 1.11
CMTM3-211ENST00000565922 NAMPTP43490 491 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 MRPS5P82675 430 aaKnown RBP21.99■■□□□ 1.11
CMTM3-211ENST00000565922 UBE3AQ05086 875 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 MBTD1Q05BQ5 628 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 TJAP1Q5JTD0 557 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 CLLU1OSQ5K130 101 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 HYIQ5T013 277 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 GLB1LQ6UWU2 654 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 KLHL23Q8NBE8 558 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 HELQQ8TDG4 1101 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 HLA-CQ95604 372 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 PPP2R3CQ969Q6 453 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 IFT74Q96LB3 600 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 PRIMPOLQ96LW4 560 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 PRDM6Q9NQX0 595 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 DAXXQ9UER7 740 aaPredicted RBP21.99■■□□□ 1.11
CMTM3-211ENST00000565922 PCDHB2Q9Y5E7 798 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 CNTNAP2Q9UHC6 1331 aa21.99■■□□□ 1.11
CMTM3-211ENST00000565922 HOXA11P31270 313 aaPredicted RBP21.98■■□□□ 1.11
CMTM3-211ENST00000565922 PPM1AP35813 382 aa21.98■■□□□ 1.11
CMTM3-211ENST00000565922 CDCA2Q69YH5 1023 aaPredicted RBP21.98■■□□□ 1.11
CMTM3-211ENST00000565922 THNSL1Q8IYQ7 743 aa21.98■■□□□ 1.11
CMTM3-211ENST00000565922 HACE1Q8IYU2 909 aa21.98■■□□□ 1.11
CMTM3-211ENST00000565922 COLGALT1Q8NBJ5 622 aa21.98■■□□□ 1.11
CMTM3-211ENST00000565922 MMTAG2Q9BU76 263 aaKnown RBP21.98■■□□□ 1.11
CMTM3-211ENST00000565922 ZSCAN16Q9H4T2 348 aaPredicted RBP21.98■■□□□ 1.11
CMTM3-211ENST00000565922 CWH43Q9H720 699 aa21.98■■□□□ 1.11
CMTM3-211ENST00000565922 ALG13Q9NP73 1137 aaKnown RBP21.98■■□□□ 1.11
CMTM3-211ENST00000565922 PRMT7Q9NVM4 692 aaPredicted RBP21.98■■□□□ 1.11
CMTM3-211ENST00000565922 E9PMD0 336 aa21.97■■□□□ 1.11
CMTM3-211ENST00000565922 STX6O43752 255 aa21.97■■□□□ 1.11
CMTM3-211ENST00000565922 ITGB1P05556 798 aa21.97■■□□□ 1.11
CMTM3-211ENST00000565922 CDC25AP30304 524 aa21.97■■□□□ 1.11
CMTM3-211ENST00000565922 SF3A1Q15459 793 aaKnown RBP21.97■■□□□ 1.11
CMTM3-211ENST00000565922 ZRSR1Q15695 479 aaKnown RBP21.97■■□□□ 1.11
CMTM3-211ENST00000565922 URGCPQ8TCY9 931 aa21.97■■□□□ 1.11
CMTM3-211ENST00000565922 ZNF558Q96NG5 402 aa21.97■■□□□ 1.11
CMTM3-211ENST00000565922 TIPINQ9BVW5 301 aa21.97■■□□□ 1.11
CMTM3-211ENST00000565922 TRIM6Q9C030 488 aaPredicted RBP21.97■■□□□ 1.11
CMTM3-211ENST00000565922 UBN1Q9NPG3 1134 aa21.97■■□□□ 1.11
CMTM3-211ENST00000565922 FOXD4L1Q9NU39 408 aa21.97■■□□□ 1.11
CMTM3-211ENST00000565922 NCK2O43639 380 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 LONP1P36776 959 aaKnown RBP21.96■■□□□ 1.11
CMTM3-211ENST00000565922 UBA7P41226 1012 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 RESTQ13127 1097 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 FAM187BQ17R55 369 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 PPP4R3CPQ6ZMV5 832 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 MRPL10Q7Z7H8 261 aaKnown RBP21.96■■□□□ 1.11
CMTM3-211ENST00000565922 CABP7Q86V35 215 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 DEPTORQ8TB45 409 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 SPPL3Q8TCT6 385 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 POF1BQ8WVV4 589 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms