RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 MCM6Q14566 821 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 DSC3Q14574 896 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 MAPK6Q16659 721 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 FAM187BQ17R55 369 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 RESP18Q5W5W9 173 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 CDCA2Q69YH5 1023 aaPredicted RBP13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 SHC4Q6S5L8 630 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 APBB1IPQ7Z5R6 666 aaPredicted RBP13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 GPBP1Q86WP2 473 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 NPAS4Q8IUM7 802 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 CNNM3Q8NE01 707 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 SPIRE2Q8WWL2 714 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 CCDC34Q96HJ3 373 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 IPO9Q96P70 1041 aaKnown RBP13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 RUSC1Q9BVN2 902 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 TMX1Q9H3N1 280 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 TMEM134Q9H6X4 195 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 GPRC5CQ9NQ84 441 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 LRFN2Q9ULH4 789 aa13.91□□□□□ -0.18
SHCBP1-204ENST00000565887 A0A0U1RQF3 1178 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 CCDC169A6NNP5 214 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 C9IYK1 514 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 K7ERI5 159 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 HOXA2O43364 376 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 TLL1O43897 1013 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 RAB27AP51159 221 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 TCTN1Q2MV58 587 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 ARSHQ5FYA8 562 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 NOTUMQ6P988 496 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 RTN4RL1Q86UN2 441 aaPredicted RBP13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 ZNF668Q96K58 619 aaPredicted RBP13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 PANK2Q9BZ23 570 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 TNMDQ9H2S6 317 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 FZD8Q9H461 694 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 KMT5AQ9NQR1 393 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 AGPAT5Q9NUQ2 364 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 SEL1LQ9UBV2 794 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 KCNH3Q9ULD8 1083 aa13.9□□□□□ -0.18
SHCBP1-204ENST00000565887 ACKR2O00590 384 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 POLR2DO15514 142 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 ZNF623O75123 536 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 TBCAO75347 108 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 FAM13AO94988 1023 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 NPTX2P47972 431 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 PEX3P56589 373 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 DEFB103AP81534 67 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 MBTD1Q05BQ5 628 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 GIT2Q14161 759 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 DHX8Q14562 1220 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 NAALADL2Q58DX5 795 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 TWF2Q6IBS0 349 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 HACE1Q8IYU2 909 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 CEP57L1Q8IYX8 460 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 PDILTQ8N807 584 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 KCNN1Q92952 543 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 PGBD4Q96DM1 585 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 PBX4Q9BYU1 374 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 MINDY3Q9H8M7 445 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 SLC28A3Q9HAS3 691 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 PARVGQ9HBI0 331 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 KBTBD4Q9NVX7 518 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 TMEM161AQ9NX61 479 aa13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 PIN4Q9Y237 131 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 RANBP2P49792 3224 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-204ENST00000565887 TTC3P53804 2025 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 MICAL3Q7RTP6 2002 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 FAM237AA0A1B0GTK4 181 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 CARNS1A5YM72 827 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 CSDE1O75534 798 aaKnown RBP13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 UPP2O95045 317 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 MYL1P05976 194 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 SLFN14P0C7P3 912 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 MAPTP10636 758 aaKnown RBP13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 GAP43P17677 238 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 DNAJB2P25686 324 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 ZNF131P52739 623 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 HTRA4P83105 476 aaPredicted RBP13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 STRN3Q13033 797 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 MAPK7Q13164 816 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 CNNM4Q6P4Q7 775 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 DAW1Q8N136 415 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 CRIPAKQ8N1N5 446 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 MYCT1Q8N699 235 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 DDX12PQ92771 950 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 TIFAQ96CG3 184 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 YME1L1Q96TA2 773 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 UBN1Q9NPG3 1134 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 TCHHQ07283 1943 aa13.88□□□□□ -0.19
SHCBP1-204ENST00000565887 SIP14410 1827 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 A0A1B0GUA9 196 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 GRXCR1A8MXD5 290 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 MGEA5O60502 916 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 DGKIO75912 1065 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 FGFR4P22455 802 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 HOXA11P31270 313 aaPredicted RBP13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 FXR1P51114 621 aaKnown RBP eCLIP13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 PRPF4BQ13523 1007 aaKnown RBP13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 E2F4Q16254 413 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms