RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 PNMA5Q96PV4 448 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 PLVAPQ9BX97 442 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 TMEM117Q9H0C3 514 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 PRRC2BQ5JSZ5 2229 aaKnown RBP17.1■□□□□ 0.33
COMMD4-212ENST00000565517 INO80B-WBP1J3KQ70 363 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 ERLIN2O94905 339 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 MBTD1Q05BQ5 628 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 TMEM119Q4V9L6 283 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 NAALADL2Q58DX5 795 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 CDCA2Q69YH5 1023 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-212ENST00000565517 KCNK18Q7Z418 384 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 CCDC51Q96ER9 411 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 CALML4Q96GE6 196 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 CDK5RAP3Q96JB5 506 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 TIPINQ9BVW5 301 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 C2orf40Q9H1Z8 148 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 FAM105AQ9NUU6 356 aa17.09■□□□□ 0.33
COMMD4-212ENST00000565517 SRPRBQ9Y5M8 271 aaKnown RBP17.09■□□□□ 0.33
COMMD4-212ENST00000565517 MRPL42Q9Y6G3 142 aaKnown RBP17.09■□□□□ 0.33
COMMD4-212ENST00000565517 LRRIQ4A6NIV6 560 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 FGFR1P11362 822 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-212ENST00000565517 IBSPP21815 317 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-212ENST00000565517 CTNNB1P35222 781 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 NAMPTP43490 491 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 GATMP50440 423 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 SLC39A14Q15043 492 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 ZRSR1Q15695 479 aaKnown RBP17.08■□□□□ 0.32
COMMD4-212ENST00000565517 FAM187BQ17R55 369 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 PAN2Q504Q3 1202 aaKnown RBP17.08■□□□□ 0.32
COMMD4-212ENST00000565517 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 ZBTB8OSQ8IWT0 167 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 SYT2Q8N9I0 419 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-212ENST00000565517 GDPD5Q8WTR4 605 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 P2RX5Q93086 422 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 IFT74Q96LB3 600 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 PRIMPOLQ96LW4 560 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 CASD1Q96PB1 797 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 C11orf84Q9BUA3 381 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-212ENST00000565517 CCSER1Q9C0I3 900 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 RNF19AQ9NV58 838 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 KCND2Q9NZV8 630 aa17.08■□□□□ 0.32
COMMD4-212ENST00000565517 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-212ENST00000565517 EYSQ5T1H1 3165 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 TSPAN1O60635 241 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-212ENST00000565517 GUCY2CP25092 1073 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 NASPP49321 788 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-212ENST00000565517 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 GRIN1Q05586 938 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 GPM6BQ13491 265 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 AMHR2Q16671 573 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 NOTUMQ6P988 496 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 MRPL10Q7Z7H8 261 aaKnown RBP17.07■□□□□ 0.32
COMMD4-212ENST00000565517 ABI1Q8IZP0 508 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 CNNM3Q8NE01 707 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 BSNDQ8WZ55 320 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 PGBD4Q96DM1 585 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 DRC1Q96MC2 740 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 ZNF396Q96N95 335 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-212ENST00000565517 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 FZD8Q9H461 694 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 C17orf75Q9HAS0 396 aa17.07■□□□□ 0.32
COMMD4-212ENST00000565517 PRMT7Q9NVM4 692 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-212ENST00000565517 FBXO2Q9UK22 296 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-212ENST00000565517 ARF4P18085 180 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-212ENST00000565517 MARCKSP29966 332 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-212ENST00000565517 CEBPZQ03701 1054 aaKnown RBP17.06■□□□□ 0.32
COMMD4-212ENST00000565517 PTPROQ16827 1216 aa17.06■□□□□ 0.32
COMMD4-212ENST00000565517 CLLU1OSQ5K130 101 aa17.06■□□□□ 0.32
COMMD4-212ENST00000565517 UBXN11Q5T124 520 aa17.06■□□□□ 0.32
COMMD4-212ENST00000565517 RNF169Q8NCN4 708 aa17.06■□□□□ 0.32
COMMD4-212ENST00000565517 MRPL38Q96DV4 380 aaKnown RBP17.06■□□□□ 0.32
COMMD4-212ENST00000565517 RUSC1Q9BVN2 902 aa17.06■□□□□ 0.32
COMMD4-212ENST00000565517 LMAN2LQ9H0V9 348 aa17.06■□□□□ 0.32
COMMD4-212ENST00000565517 CSRNP2Q9H175 543 aa17.06■□□□□ 0.32
COMMD4-212ENST00000565517 AAASQ9NRG9 546 aa17.06■□□□□ 0.32
COMMD4-212ENST00000565517 TYW1Q9NV66 732 aaKnown RBP17.06■□□□□ 0.32
COMMD4-212ENST00000565517 KCNG1Q9UIX4 513 aa17.06■□□□□ 0.32
COMMD4-212ENST00000565517 PCDHB2Q9Y5E7 798 aa17.06■□□□□ 0.32
COMMD4-212ENST00000565517 A0A1B0GUA9 196 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 F13A1P00488 732 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 PLA2G4BP0C869 781 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 NCLP19338 710 aaKnown RBP17.05■□□□□ 0.32
COMMD4-212ENST00000565517 EFNA5P52803 228 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 MAPK6Q16659 721 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 ATL3Q6DD88 541 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 DAW1Q8N136 415 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 LRRC43Q8N309 656 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 LINC00301Q8NCQ3 95 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 DEPTORQ8TB45 409 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 PLIN2Q99541 437 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 MRPL9Q9BYD2 267 aaKnown RBP17.05■□□□□ 0.32
COMMD4-212ENST00000565517 CWH43Q9H720 699 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms