RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 CLEC1BQ9P126 229 aa22.2■■□□□ 1.14
CLN6-206ENST00000565471 C19orf67A6NJJ6 358 aa22.19■■□□□ 1.14
CLN6-206ENST00000565471 WNT7AO00755 349 aa22.19■■□□□ 1.14
CLN6-206ENST00000565471 ASAP2O43150 1006 aa22.19■■□□□ 1.14
CLN6-206ENST00000565471 EYA4O95677 639 aa22.19■■□□□ 1.14
CLN6-206ENST00000565471 COASYQ13057 564 aa22.19■■□□□ 1.14
CLN6-206ENST00000565471 SAFBQ15424 915 aaKnown RBP eCLIP22.19■■□□□ 1.14
CLN6-206ENST00000565471 RBM23Q86U06 439 aaKnown RBP22.19■■□□□ 1.14
CLN6-206ENST00000565471 MTMR9Q96QG7 549 aa22.19■■□□□ 1.14
CLN6-206ENST00000565471 ZBTB39O15060 712 aa22.18■■□□□ 1.14
CLN6-206ENST00000565471 GLP2RO95838 553 aa22.18■■□□□ 1.14
CLN6-206ENST00000565471 KRT17Q04695 432 aa22.18■■□□□ 1.14
CLN6-206ENST00000565471 LAMTOR4Q0VGL1 99 aa22.18■■□□□ 1.14
CLN6-206ENST00000565471 DUSP6Q16828 381 aa22.18■■□□□ 1.14
CLN6-206ENST00000565471 FERMT3Q86UX7 667 aa22.18■■□□□ 1.14
CLN6-206ENST00000565471 CCDC83Q8IWF9 413 aa22.18■■□□□ 1.14
CLN6-206ENST00000565471 SLC39A11Q8N1S5 342 aa22.18■■□□□ 1.14
CLN6-206ENST00000565471 POP1Q99575 1024 aaKnown RBP22.18■■□□□ 1.14
CLN6-206ENST00000565471 MTRQ99707 1265 aa22.18■■□□□ 1.14
CLN6-206ENST00000565471 NGRNQ9NPE2 291 aaKnown RBP22.18■■□□□ 1.14
CLN6-206ENST00000565471 ANKEF1Q9NU02 776 aa22.18■■□□□ 1.14
CLN6-206ENST00000565471 CARNS1A5YM72 827 aa22.17■■□□□ 1.14
CLN6-206ENST00000565471 SRGAP2CP0DJJ0 459 aa22.17■■□□□ 1.14
CLN6-206ENST00000565471 PBX3P40426 434 aa22.17■■□□□ 1.14
CLN6-206ENST00000565471 TXKP42681 527 aa22.17■■□□□ 1.14
CLN6-206ENST00000565471 TMEM31Q5JXX7 168 aa22.17■■□□□ 1.14
CLN6-206ENST00000565471 SMRP1Q8NCR6 262 aa22.17■■□□□ 1.14
CLN6-206ENST00000565471 ZSCAN31Q96LW9 406 aaPredicted RBP22.17■■□□□ 1.14
CLN6-206ENST00000565471 TCF25Q9BQ70 676 aa22.17■■□□□ 1.14
CLN6-206ENST00000565471 XPNPEP1Q9NQW7 623 aa22.17■■□□□ 1.14
CLN6-206ENST00000565471 BMP2KQ9NSY1 1161 aaPredicted RBP22.17■■□□□ 1.14
CLN6-206ENST00000565471 PER2O15055 1255 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 GPR37L1O60883 481 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 ALADP13716 330 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 MXD4Q14582 209 aaPredicted RBP22.16■■□□□ 1.14
CLN6-206ENST00000565471 PCBP1Q15365 356 aaKnown RBP eCLIP22.16■■□□□ 1.14
CLN6-206ENST00000565471 GLB1LQ6UWU2 654 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 RNF149Q8NC42 400 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 LPPQ93052 612 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 PGBD4Q96DM1 585 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 C8orf76Q96K31 380 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 KIF2CQ99661 725 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 LRFN3Q9BTN0 628 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 MINDY3Q9H8M7 445 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 ENTPD7Q9NQZ7 604 aa22.16■■□□□ 1.14
CLN6-206ENST00000565471 SH2B1Q9NRF2 756 aaPredicted RBP22.16■■□□□ 1.14
CLN6-206ENST00000565471 BARX2Q9UMQ3 279 aaPredicted RBP22.16■■□□□ 1.14
CLN6-206ENST00000565471 DGAT1O75907 488 aa22.15■■□□□ 1.14
CLN6-206ENST00000565471 ALDH7A1P49419 539 aaKnown RBP22.15■■□□□ 1.14
CLN6-206ENST00000565471 HMGN5P82970 282 aaKnown RBP22.15■■□□□ 1.14
CLN6-206ENST00000565471 GUCY1B3Q02153 619 aa22.15■■□□□ 1.14
CLN6-206ENST00000565471 ORC2Q13416 577 aaPredicted RBP22.15■■□□□ 1.14
CLN6-206ENST00000565471 C8orf34Q49A92 452 aa22.15■■□□□ 1.14
CLN6-206ENST00000565471 PLPP4Q5VZY2 271 aa22.15■■□□□ 1.14
CLN6-206ENST00000565471 TMEM184AQ6ZMB5 413 aa22.15■■□□□ 1.14
CLN6-206ENST00000565471 TMEM60Q9H2L4 133 aa22.15■■□□□ 1.14
CLN6-206ENST00000565471 FOXP1Q9H334 677 aaPredicted RBP22.15■■□□□ 1.14
CLN6-206ENST00000565471 C11orf16Q9NQ32 467 aa22.15■■□□□ 1.14
CLN6-206ENST00000565471 PCDHB2Q9Y5E7 798 aa22.15■■□□□ 1.14
CLN6-206ENST00000565471 SRGAP2BP0DMP2 458 aa22.14■■□□□ 1.13
CLN6-206ENST00000565471 XRCC6P12956 609 aaKnown RBP eCLIP22.14■■□□□ 1.13
CLN6-206ENST00000565471 HOXA11P31270 313 aaPredicted RBP22.14■■□□□ 1.13
CLN6-206ENST00000565471 BCAR1P56945 870 aa22.14■■□□□ 1.13
CLN6-206ENST00000565471 PTENP60484 403 aa22.14■■□□□ 1.13
CLN6-206ENST00000565471 POU5F1BQ06416 359 aa22.14■■□□□ 1.13
CLN6-206ENST00000565471 KCNC3Q14003 757 aa22.14■■□□□ 1.13
CLN6-206ENST00000565471 NOMO2Q5JPE7 1267 aa22.14■■□□□ 1.13
CLN6-206ENST00000565471 MRPL10Q7Z7H8 261 aaKnown RBP22.14■■□□□ 1.13
CLN6-206ENST00000565471 IFNLR1Q8IU57 520 aaPredicted RBP22.14■■□□□ 1.13
CLN6-206ENST00000565471 VN1R2Q8NFZ6 395 aa22.14■■□□□ 1.13
CLN6-206ENST00000565471 TBC1D13Q9NVG8 400 aa22.14■■□□□ 1.13
CLN6-206ENST00000565471 POTEMA6NI47 508 aa22.13■■□□□ 1.13
CLN6-206ENST00000565471 MEIS3P2A8K0S8 358 aa22.13■■□□□ 1.13
CLN6-206ENST00000565471 OFD1O75665 1012 aa22.13■■□□□ 1.13
CLN6-206ENST00000565471 MCM7P33993 719 aa22.13■■□□□ 1.13
CLN6-206ENST00000565471 RARRES1P49788 294 aa22.13■■□□□ 1.13
CLN6-206ENST00000565471 TFDP1Q14186 410 aa22.13■■□□□ 1.13
CLN6-206ENST00000565471 TMC7Q7Z402 723 aa22.13■■□□□ 1.13
CLN6-206ENST00000565471 FBXO18Q8NFZ0 1043 aa22.13■■□□□ 1.13
CLN6-206ENST00000565471 TMEM169Q96HH4 297 aa22.13■■□□□ 1.13
CLN6-206ENST00000565471 CCDC43Q96MW1 224 aaKnown RBP22.13■■□□□ 1.13
CLN6-206ENST00000565471 CNTNAP2Q9UHC6 1331 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 HIDE1A8MVS5 230 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 DCXO43602 365 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 ZC3H11AO75152 810 aaKnown RBP eCLIP22.12■■□□□ 1.13
CLN6-206ENST00000565471 ERLIN2O94905 339 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 ATP2B1P20020 1258 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 AXLP30530 894 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 ARL2P36404 184 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 SMC1AQ14683 1233 aaKnown RBP22.12■■□□□ 1.13
CLN6-206ENST00000565471 LONRF3Q496Y0 759 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 UBXN11Q5T124 520 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 AGMOQ6ZNB7 445 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 NRDE2Q9H7Z3 1164 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 TUFT1Q9NNX1 390 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 INPP5FQ9Y2H2 1132 aa22.12■■□□□ 1.13
CLN6-206ENST00000565471 USP15Q9Y4E8 981 aaPredicted RBP22.12■■□□□ 1.13
CLN6-206ENST00000565471 NT5C1B-RDH14C9J2C7 533 aa22.11■■□□□ 1.13
CLN6-206ENST00000565471 SPATA31C1P0DKV0 1188 aa22.11■■□□□ 1.13
CLN6-206ENST00000565471 RBM25P49756 843 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms