RNA–Protein interactions for RNA: ENST00000564865.5

PKD1-228, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-228ENST00000564865 ABI1Q8IZP0 508 aa15.21■□□□□ 0.03
PKD1-228ENST00000564865 BSNDQ8WZ55 320 aa15.21■□□□□ 0.03
PKD1-228ENST00000564865 CLP1Q92989 425 aaKnown RBP15.21■□□□□ 0.03
PKD1-228ENST00000564865 LPPQ93052 612 aa15.21■□□□□ 0.03
PKD1-228ENST00000564865 CPB2Q96IY4 423 aa15.21■□□□□ 0.03
PKD1-228ENST00000564865 TMEM117Q9H0C3 514 aa15.21■□□□□ 0.03
PKD1-228ENST00000564865 FAM105AQ9NUU6 356 aa15.21■□□□□ 0.03
PKD1-228ENST00000564865 RWDD3Q9Y3V2 267 aa15.21■□□□□ 0.03
PKD1-228ENST00000564865 COL4A6Q14031 1691 aa15.21■□□□□ 0.03
PKD1-228ENST00000564865 TSPAN1O60635 241 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 RB1P06400 928 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 LINC00271P0C7V0 271 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 PLA2G4BP0C869 781 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 ZSCAN22P10073 491 aaPredicted RBP15.2■□□□□ 0.02
PKD1-228ENST00000564865 SKIP12755 728 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 LIG1P18858 919 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 POU3F3P20264 500 aaPredicted RBP15.2■□□□□ 0.02
PKD1-228ENST00000564865 HOXA11P31270 313 aaPredicted RBP15.2■□□□□ 0.02
PKD1-228ENST00000564865 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
PKD1-228ENST00000564865 SPECC1Q5M775 1068 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 RINT1Q6NUQ1 792 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
PKD1-228ENST00000564865 ZNF598Q86UK7 904 aaKnown RBP15.2■□□□□ 0.02
PKD1-228ENST00000564865 DEPTORQ8TB45 409 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 HELQQ8TDG4 1101 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 KIFAP3Q92845 792 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 IFT74Q96LB3 600 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 CLIC6Q96NY7 704 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 CASD1Q96PB1 797 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 RUSC1Q9BVN2 902 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 TRAIPQ9BWF2 469 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 NFKBIZQ9BYH8 718 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 CSRNP2Q9H175 543 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 RNF19AQ9NV58 838 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 TYW1Q9NV66 732 aaKnown RBP15.2■□□□□ 0.02
PKD1-228ENST00000564865 TFIP11Q9UBB9 837 aaKnown RBP15.2■□□□□ 0.02
PKD1-228ENST00000564865 HCSTQ9UBK5 93 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 FBXO2Q9UK22 296 aaPredicted RBP15.2■□□□□ 0.02
PKD1-228ENST00000564865 PCDHB2Q9Y5E7 798 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 SRPRBQ9Y5M8 271 aaKnown RBP15.2■□□□□ 0.02
PKD1-228ENST00000564865 CHD9Q3L8U1 2897 aa15.2■□□□□ 0.02
PKD1-228ENST00000564865 HIP1RO75146 1068 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 PDIA4P13667 645 aaKnown RBP15.19■□□□□ 0.02
PKD1-228ENST00000564865 ATF7P17544 494 aaPredicted RBP15.19■□□□□ 0.02
PKD1-228ENST00000564865 AXLP30530 894 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 NAMPTP43490 491 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 RAB27AP51159 221 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 RAD51AP2Q09MP3 1159 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 DHX8Q14562 1220 aaKnown RBP15.19■□□□□ 0.02
PKD1-228ENST00000564865 SLC39A14Q15043 492 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 KARSQ15046 597 aaKnown RBP15.19■□□□□ 0.02
PKD1-228ENST00000564865 PPP2R5AQ15172 486 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 STK38Q15208 465 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 PCBP1Q15365 356 aaKnown RBP eCLIP15.19■□□□□ 0.02
PKD1-228ENST00000564865 SKIV2LQ15477 1246 aaKnown RBP15.19■□□□□ 0.02
PKD1-228ENST00000564865 AMHR2Q16671 573 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 TMEM119Q4V9L6 283 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 CLLU1OSQ5K130 101 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 UBXN11Q5T124 520 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 C1orf186Q6ZWK4 172 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 KCTD17Q8N5Z5 321 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 SYT2Q8N9I0 419 aaPredicted RBP15.19■□□□□ 0.02
PKD1-228ENST00000564865 SLC17A8Q8NDX2 589 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 PGBD4Q96DM1 585 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 EPSTI1Q96J88 318 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 ZNF396Q96N95 335 aaPredicted RBP15.19■□□□□ 0.02
PKD1-228ENST00000564865 C11orf84Q9BUA3 381 aaPredicted RBP15.19■□□□□ 0.02
PKD1-228ENST00000564865 C2orf40Q9H1Z8 148 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 LMCD1Q9NZU5 365 aa15.19■□□□□ 0.02
PKD1-228ENST00000564865 DAXXQ9UER7 740 aaPredicted RBP15.19■□□□□ 0.02
PKD1-228ENST00000564865 COL4A4P53420 1690 aaPredicted RBP15.19■□□□□ 0.02
PKD1-228ENST00000564865 CCDC169A6NNP5 214 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 MEIS3P2A8K0S8 358 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 SFI1A8K8P3 1242 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 C5orf67F2Z3F1 127 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 B4GALT5O43286 388 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 SLC26A4O43511 780 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 ZNF623O75123 536 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 CSPG5O95196 566 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 F13A1P00488 732 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 ARF4P18085 180 aaPredicted RBP15.18■□□□□ 0.02
PKD1-228ENST00000564865 PEX3P56589 373 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 PKP1Q13835 747 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 PTPROQ16827 1216 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 TMEM132AQ24JP5 1023 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 CDCA2Q69YH5 1023 aaPredicted RBP15.18■□□□□ 0.02
PKD1-228ENST00000564865 NOTUMQ6P988 496 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 LRRC55Q6ZSA7 311 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 USP49Q70CQ1 688 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 CDR2LQ86X02 465 aaPredicted RBP15.18■□□□□ 0.02
PKD1-228ENST00000564865 KIFC3Q9BVG8 833 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 PLVAPQ9BX97 442 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 EIF2AQ9BY44 585 aaKnown RBP15.18■□□□□ 0.02
PKD1-228ENST00000564865 CWH43Q9H720 699 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 ALG13Q9NP73 1137 aaKnown RBP15.18■□□□□ 0.02
PKD1-228ENST00000564865 PRDM6Q9NQX0 595 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 AAASQ9NRG9 546 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 PRMT7Q9NVM4 692 aaPredicted RBP15.18■□□□□ 0.02
PKD1-228ENST00000564865 PCDHB12Q9Y5F1 795 aa15.18■□□□□ 0.02
PKD1-228ENST00000564865 CDH23Q9H251 3354 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms