RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 KANK3Q6NY19 840 aa17.85■□□□□ 0.45
CDH11-210ENST00000564770 VPS52Q8N1B4 723 aa17.85■□□□□ 0.45
CDH11-210ENST00000564770 C12orf76Q8N812 135 aaPredicted RBP17.85■□□□□ 0.45
CDH11-210ENST00000564770 ZNF579Q8NAF0 562 aaKnown RBP17.85■□□□□ 0.45
CDH11-210ENST00000564770 NLRP4Q96MN2 994 aa17.85■□□□□ 0.45
CDH11-210ENST00000564770 ADAM7Q9H2U9 754 aa17.85■□□□□ 0.45
CDH11-210ENST00000564770 SMOC2Q9H3U7 446 aa17.85■□□□□ 0.45
CDH11-210ENST00000564770 NRDE2Q9H7Z3 1164 aa17.85■□□□□ 0.45
CDH11-210ENST00000564770 IFT122Q9HBG6 1241 aa17.85■□□□□ 0.45
CDH11-210ENST00000564770 DNAJB4Q9UDY4 337 aa17.85■□□□□ 0.45
CDH11-210ENST00000564770 DDX25Q9UHL0 483 aaKnown RBP17.85■□□□□ 0.45
CDH11-210ENST00000564770 KCNJ14Q9UNX9 436 aa17.85■□□□□ 0.45
CDH11-210ENST00000564770 INPP5FQ9Y2H2 1132 aa17.85■□□□□ 0.45
CDH11-210ENST00000564770 DDX11L8A8MPP1 907 aa17.84■□□□□ 0.45
CDH11-210ENST00000564770 EPCAMP16422 314 aa17.84■□□□□ 0.45
CDH11-210ENST00000564770 ALDH7A1P49419 539 aaKnown RBP17.84■□□□□ 0.45
CDH11-210ENST00000564770 PTPN5P54829 565 aa17.84■□□□□ 0.45
CDH11-210ENST00000564770 NPEPPSP55786 919 aa17.84■□□□□ 0.45
CDH11-210ENST00000564770 ZNF274Q96GC6 653 aaPredicted RBP17.84■□□□□ 0.45
CDH11-210ENST00000564770 IGSF21Q96ID5 467 aa17.84■□□□□ 0.45
CDH11-210ENST00000564770 KCNMB3Q9NPA1 279 aa17.84■□□□□ 0.45
CDH11-210ENST00000564770 AGPAT5Q9NUQ2 364 aa17.84■□□□□ 0.45
CDH11-210ENST00000564770 CYP46A1Q9Y6A2 500 aa17.84■□□□□ 0.45
CDH11-210ENST00000564770 CPLX1O14810 134 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 BRD1O95696 1058 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 GALTP07902 379 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 CTSAP10619 480 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 SLC11A1P49279 550 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 DNM2P50570 870 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 AFF1P51825 1210 aaKnown RBP17.83■□□□□ 0.44
CDH11-210ENST00000564770 PSMC5P62195 406 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 ITIH3Q06033 890 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 PPP2R5CQ13362 524 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 LETM2Q2VYF4 491 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 TPRNQ4KMQ1 711 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 NOMO2Q5JPE7 1267 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 RARS2Q5T160 578 aaKnown RBP17.83■□□□□ 0.44
CDH11-210ENST00000564770 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 CATSPER4Q7RTX7 472 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 KREMEN2Q8NCW0 462 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 MINDY3Q9H8M7 445 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 CYP26B1Q9NR63 512 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 BMP2KQ9NSY1 1161 aaPredicted RBP17.83■□□□□ 0.44
CDH11-210ENST00000564770 GJB4Q9NTQ9 266 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 FAM86C1Q9NVL1 165 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 COL4A3BPQ9Y5P4 624 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 IRAK3Q9Y616 596 aa17.83■□□□□ 0.44
CDH11-210ENST00000564770 ZNF623O75123 536 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 OFD1O75665 1012 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 CXCL14O95715 111 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 RAB27AP51159 221 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 CDC42EP1Q00587 391 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 PTPN14Q15678 1187 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 GALNT17Q6IS24 598 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 KIAA1841Q6NSI8 718 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 CES5AQ6NT32 575 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 KRT25Q7Z3Z0 450 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 ZBTB33Q86T24 672 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 ZNF280BQ86YH2 543 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 NECTIN4Q96NY8 510 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 PHF20Q9BVI0 1012 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 GBP3Q9H0R5 595 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 NR2E1Q9Y466 385 aa17.82■□□□□ 0.44
CDH11-210ENST00000564770 ASGR2P07307 311 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 AVPR2P30518 371 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 QARSP47897 775 aaKnown RBP17.81■□□□□ 0.44
CDH11-210ENST00000564770 POLGP54098 1239 aaPredicted RBP17.81■□□□□ 0.44
CDH11-210ENST00000564770 SCRN1Q12765 414 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 EARS2Q5JPH6 523 aaKnown RBP17.81■□□□□ 0.44
CDH11-210ENST00000564770 AGMOQ6ZNB7 445 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 DDX53Q86TM3 631 aaKnown RBP17.81■□□□□ 0.44
CDH11-210ENST00000564770 POTEDQ86YR6 584 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 FAM177A1Q8N128 213 aaPredicted RBP17.81■□□□□ 0.44
CDH11-210ENST00000564770 OXER1Q8TDS5 423 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 SLC22A17Q8WUG5 538 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 RSPH1Q8WYR4 309 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 HAS1Q92839 578 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 TMEM143Q96AN5 459 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 TM6SF1Q9BZW5 370 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 INO80BQ9C086 356 aaPredicted RBP17.81■□□□□ 0.44
CDH11-210ENST00000564770 DHX33Q9H6R0 707 aaKnown RBP17.81■□□□□ 0.44
CDH11-210ENST00000564770 SORCS3Q9UPU3 1222 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 PCDHB2Q9Y5E7 798 aa17.81■□□□□ 0.44
CDH11-210ENST00000564770 STK36Q9NRP7 1315 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 ZFHX2Q9C0A1 2572 aaPredicted RBP17.8■□□□□ 0.44
CDH11-210ENST00000564770 FAM205CA6NFA0 338 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 EPB41L2O43491 1005 aaKnown RBP17.8■□□□□ 0.44
CDH11-210ENST00000564770 DDHD2O94830 711 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 SKIP12755 728 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 MTHFRP42898 656 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 MTMR3Q13615 1198 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 UBXN11Q5T124 520 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 NEK8Q86SG6 692 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 PRPF31Q8WWY3 499 aaKnown RBP17.8■□□□□ 0.44
CDH11-210ENST00000564770 RIPOR3Q96MK2 946 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 PRRX2Q99811 253 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 LXNQ9BS40 222 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 DZANK1Q9NVP4 752 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 WDR87Q6ZQQ6 2873 aa17.8■□□□□ 0.44
CDH11-210ENST00000564770 CCDC194A0A1B0GVG4 234 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms