RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 RGS18Q9NS28 235 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 KCNH3Q9ULD8 1083 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 ODF2LQ9ULJ1 636 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 PCDHB7Q9Y5E2 793 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 SFI1A8K8P3 1242 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 K7ERI5 159 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 POLR2DO15514 142 aaKnown RBP17.65■□□□□ 0.42
RAB40C-208ENST00000564703 TLL1O43897 1013 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 TBCAO75347 108 aaKnown RBP17.65■□□□□ 0.42
RAB40C-208ENST00000564703 FAM13AO94988 1023 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 AXLP30530 894 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 MAPK6Q16659 721 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 TMEM132AQ24JP5 1023 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 ARSHQ5FYA8 562 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 TWF2Q6IBS0 349 aaKnown RBP17.65■□□□□ 0.42
RAB40C-208ENST00000564703 GDPD2Q9HCC8 539 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 KMT5AQ9NQR1 393 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 PIN4Q9Y237 131 aaKnown RBP17.65■□□□□ 0.42
RAB40C-208ENST00000564703 INSL6Q9Y581 213 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 PCDHA11Q9Y5I1 949 aa17.65■□□□□ 0.42
RAB40C-208ENST00000564703 SIP14410 1827 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 NPHP3-ACAD11A0A0J9YXS1 232 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 SKIP12755 728 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 PLS3P13797 630 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 LIG1P18858 919 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 RABGGTBP53611 331 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 FAM109BQ6ICB4 259 aaPredicted RBP17.64■□□□□ 0.41
RAB40C-208ENST00000564703 CEP57L1Q8IYX8 460 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 MYCT1Q8N699 235 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 BSNDQ8WZ55 320 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 RAD9AQ99638 391 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 MINDY3Q9H8M7 445 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 PRMT7Q9NVM4 692 aaPredicted RBP17.64■□□□□ 0.41
RAB40C-208ENST00000564703 PHLPP2Q6ZVD8 1323 aa17.64■□□□□ 0.41
RAB40C-208ENST00000564703 A0A087X0B3 334 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 A0A1W2PQ27 194 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 A0A1W2PQ64 194 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 A0A1W2PQD8 194 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 H0YCG3 227 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 MGEA5O60502 916 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 GJB5O95377 273 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 NPTX2P47972 431 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 SARSP49591 514 aaKnown RBP17.63■□□□□ 0.41
RAB40C-208ENST00000564703 CACNB1Q02641 598 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-208ENST00000564703 MBTD1Q05BQ5 628 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 GIT2Q14161 759 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 DSC3Q14574 896 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 NAALADL2Q58DX5 795 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 DYMQ7RTS9 669 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 NPAS4Q8IUM7 802 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 DDX12PQ92771 950 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 YME1L1Q96TA2 773 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 REEP2Q9BRK0 252 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 NTPCRQ9BSD7 190 aaKnown RBP17.63■□□□□ 0.41
RAB40C-208ENST00000564703 SLC28A3Q9HAS3 691 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 MAGEF1Q9HAY2 307 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 MICAL3Q7RTP6 2002 aa17.63■□□□□ 0.41
RAB40C-208ENST00000564703 A0A1B0GVL5 298 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 C9IYK1 514 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 IDEP14735 1019 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 MAPK7Q13164 816 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 CDCA2Q69YH5 1023 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-208ENST00000564703 NOTUMQ6P988 496 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 TMCO2Q7Z6W1 182 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-208ENST00000564703 DAW1Q8N136 415 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 LRRC15Q8TF66 581 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 SPIRE2Q8WWL2 714 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 PRIMPOLQ96LW4 560 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 PBX4Q9BYU1 374 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 TNMDQ9H2S6 317 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 PARVGQ9HBI0 331 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 AGPAT5Q9NUQ2 364 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 USP25Q9UHP3 1055 aa17.62■□□□□ 0.41
RAB40C-208ENST00000564703 MYH11P35749 1972 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 A0A0U1RQF3 1178 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 MYMKA6NI61 221 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 RBAK-RBAKDNI3L0D1 243 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 SLC16A4O15374 487 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 EOMESO95936 686 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 PRKCBP05771 671 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 PFKFB1P16118 471 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 DNAJB2P25686 324 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 SYKP43405 635 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 RAB27AP51159 221 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 FAM189BP81408 668 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 STRN3Q13033 797 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 PRPF4BQ13523 1007 aaKnown RBP17.61■□□□□ 0.41
RAB40C-208ENST00000564703 RNF169Q8NCN4 708 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 SLC17A8Q8NDX2 589 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 LINC01599Q8WXQ3 324 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 MRPS27Q92552 414 aaKnown RBP17.61■□□□□ 0.41
RAB40C-208ENST00000564703 TIFAQ96CG3 184 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 CCDC34Q96HJ3 373 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 LRCH3Q96II8 777 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 FZD8Q9H461 694 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 TMEM134Q9H6X4 195 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 ELAC1Q9H777 363 aaKnown RBP17.61■□□□□ 0.41
RAB40C-208ENST00000564703 TMEM161AQ9NX61 479 aa17.61■□□□□ 0.41
RAB40C-208ENST00000564703 SOX1O00570 391 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-208ENST00000564703 ACKR2O00590 384 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms