RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 ELAC1Q9H777 363 aaKnown RBP11.02□□□□□ -0.65
CDH1-206ENST00000564676 MINDY3Q9H8M7 445 aa11.02□□□□□ -0.65
CDH1-206ENST00000564676 TMEM161AQ9NX61 479 aa11.02□□□□□ -0.65
CDH1-206ENST00000564676 A0A0U1RQF3 1178 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 HOXA2O43364 376 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 ZSCAN22P10073 491 aaPredicted RBP11.01□□□□□ -0.65
CDH1-206ENST00000564676 SKIP12755 728 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 CTNNB1P35222 781 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 LONP1P36776 959 aaKnown RBP11.01□□□□□ -0.65
CDH1-206ENST00000564676 GRIN1Q05586 938 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 GRB10Q13322 594 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 PPP2R5AQ15172 486 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 PTPAQ15257 358 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 EPC2Q52LR7 807 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 HYIQ5T013 277 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 SPOUT1Q5T280 376 aaKnown RBP11.01□□□□□ -0.65
CDH1-206ENST00000564676 IFNLR1Q8IU57 520 aaPredicted RBP11.01□□□□□ -0.65
CDH1-206ENST00000564676 ZBTB8OSQ8IWT0 167 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 TMEM192Q8IY95 271 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 ABI1Q8IZP0 508 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 CRIPAKQ8N1N5 446 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 MICALL1Q8N3F8 863 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 DEPTORQ8TB45 409 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 GDPD5Q8WTR4 605 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 PPM1EQ8WY54 764 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 IFT74Q96LB3 600 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 ZNF396Q96N95 335 aaPredicted RBP11.01□□□□□ -0.65
CDH1-206ENST00000564676 PNMA5Q96PV4 448 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 USP28Q96RU2 1077 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 RC3H2Q9HBD1 1191 aaKnown RBP11.01□□□□□ -0.65
CDH1-206ENST00000564676 POLD4Q9HCU8 107 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 AGPAT5Q9NUQ2 364 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 RWDD3Q9Y3V2 267 aa11.01□□□□□ -0.65
CDH1-206ENST00000564676 SLC26A4O43511 780 aa11□□□□□ -0.65
CDH1-206ENST00000564676 EOMESO95936 686 aa11□□□□□ -0.65
CDH1-206ENST00000564676 FGFR1P11362 822 aa11□□□□□ -0.65
CDH1-206ENST00000564676 AXLP30530 894 aa11□□□□□ -0.65
CDH1-206ENST00000564676 BMPR1AP36894 532 aa11□□□□□ -0.65
CDH1-206ENST00000564676 MBTD1Q05BQ5 628 aa11□□□□□ -0.65
CDH1-206ENST00000564676 GPM6BQ13491 265 aa11□□□□□ -0.65
CDH1-206ENST00000564676 BECN1Q14457 450 aa11□□□□□ -0.65
CDH1-206ENST00000564676 STK38Q15208 465 aa11□□□□□ -0.65
CDH1-206ENST00000564676 PCBP1Q15365 356 aaKnown RBP eCLIP11□□□□□ -0.65
CDH1-206ENST00000564676 CCDC85BQ15834 202 aaPredicted RBP11□□□□□ -0.65
CDH1-206ENST00000564676 FOXD4L6Q3SYB3 417 aaPredicted RBP11□□□□□ -0.65
CDH1-206ENST00000564676 TMEM119Q4V9L6 283 aa11□□□□□ -0.65
CDH1-206ENST00000564676 RINT1Q6NUQ1 792 aa11□□□□□ -0.65
CDH1-206ENST00000564676 FOXD4L3Q6VB84 417 aaPredicted RBP11□□□□□ -0.65
CDH1-206ENST00000564676 KCNK18Q7Z418 384 aa11□□□□□ -0.65
CDH1-206ENST00000564676 KCTD17Q8N5Z5 321 aa11□□□□□ -0.65
CDH1-206ENST00000564676 KIFAP3Q92845 792 aa11□□□□□ -0.65
CDH1-206ENST00000564676 RUSC1Q9BVN2 902 aa11□□□□□ -0.65
CDH1-206ENST00000564676 NFKBIZQ9BYH8 718 aa11□□□□□ -0.65
CDH1-206ENST00000564676 TMEM117Q9H0C3 514 aa11□□□□□ -0.65
CDH1-206ENST00000564676 CSRNP2Q9H175 543 aa11□□□□□ -0.65
CDH1-206ENST00000564676 C2orf40Q9H1Z8 148 aa11□□□□□ -0.65
CDH1-206ENST00000564676 FAM105AQ9NUU6 356 aa11□□□□□ -0.65
CDH1-206ENST00000564676 TFIP11Q9UBB9 837 aaKnown RBP11□□□□□ -0.65
CDH1-206ENST00000564676 SRPRBQ9Y5M8 271 aaKnown RBP11□□□□□ -0.65
CDH1-206ENST00000564676 MRPL42Q9Y6G3 142 aaKnown RBP11□□□□□ -0.65
CDH1-206ENST00000564676 PRRC2BQ5JSZ5 2229 aaKnown RBP11□□□□□ -0.65
CDH1-206ENST00000564676 TSPAN1O60635 241 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 LPXNO60711 386 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 HIP1RO75146 1068 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 F13A1P00488 732 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 RB1P06400 928 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 PLA2G4BP0C869 781 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 LIG1P18858 919 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 HOXA11P31270 313 aaPredicted RBP10.99□□□□□ -0.65
CDH1-206ENST00000564676 NAMPTP43490 491 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 RAB27AP51159 221 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 SLC39A14Q15043 492 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 KARSQ15046 597 aaKnown RBP10.99□□□□□ -0.65
CDH1-206ENST00000564676 TMEM132AQ24JP5 1023 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 LONRF3Q496Y0 759 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 SPECC1Q5M775 1068 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 NOTUMQ6P988 496 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 MAMSTRQ6ZN01 415 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 C1orf186Q6ZWK4 172 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 ZNF598Q86UK7 904 aaKnown RBP10.99□□□□□ -0.65
CDH1-206ENST00000564676 SYT2Q8N9I0 419 aaPredicted RBP10.99□□□□□ -0.65
CDH1-206ENST00000564676 BSNDQ8WZ55 320 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 CLP1Q92989 425 aaKnown RBP10.99□□□□□ -0.65
CDH1-206ENST00000564676 PGBD4Q96DM1 585 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 CPB2Q96IY4 423 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 CLIC6Q96NY7 704 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 CCSER1Q9C0I3 900 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 AAASQ9NRG9 546 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 FBXO2Q9UK22 296 aaPredicted RBP10.99□□□□□ -0.65
CDH1-206ENST00000564676 PCDHB2Q9Y5E7 798 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 MTCH2Q9Y6C9 303 aa10.99□□□□□ -0.65
CDH1-206ENST00000564676 FNDC1Q4ZHG4 1894 aaPredicted RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 NLRC5Q86WI3 1866 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 CCDC169A6NNP5 214 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 H3BNC9 293 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 ZNF623O75123 536 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 ATF7P17544 494 aaPredicted RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 ARF4P18085 180 aaPredicted RBP10.98□□□□□ -0.65
CDH1-206ENST00000564676 PLCG1P19174 1290 aa10.98□□□□□ -0.65
CDH1-206ENST00000564676 TXLNAP40222 546 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms